RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 GJB7Q6PEY0 223 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 TRIM72Q6ZMU5 477 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 LRRC8DQ7L1W4 858 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 KIAA1328Q86T90 577 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 SMG8Q8ND04 991 aaKnown RBP9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 CXorf38Q8TB03 319 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 UBE2Q2Q8WVN8 375 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 ZNF560Q96MR9 790 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 SYT11Q9BT88 431 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 BCO2Q9BYV7 579 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 XYLT2Q9H1B5 865 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 TRPV6Q9H1D0 765 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 DPP3Q9NY33 737 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 SNTG2Q9NY99 539 aa9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 AJAP1Q9UKB5 411 aaPredicted RBP9.56□□□□□ -0.88
CDC42EP3-204ENST00000457889 SMIM28A0A1B0GU29 152 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 BTNL10A8MVZ5 291 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 MEFVO15553 781 aaPredicted RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 PJA2O43164 708 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 KIF5CO60282 957 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 LRRN2O75325 713 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 EOMESO95936 686 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 TFRCP02786 760 aaKnown RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 ITGB3P05106 788 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 FAM163BP0C2L3 166 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 GZMAP12544 262 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 CD52P31358 61 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 ETF1P62495 437 aaKnown RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 ARID5AQ03989 594 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 NAB2Q15742 525 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 TRAF7Q6Q0C0 670 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 ZNF571Q7Z3V5 609 aaPredicted RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 REXO1L1PQ8IX06 675 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 RNF10Q8N5U6 811 aaKnown RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 UBR7Q8N806 425 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 HPDLQ96IR7 371 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 RPS6KC1Q96S38 1066 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 DESI2Q9BSY9 194 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 PI4K2AQ9BTU6 479 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 AGO3Q9H9G7 860 aaKnown RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 APOBEC3GQ9HC16 384 aaKnown RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 RGS18Q9NS28 235 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 PARP2Q9UGN5 583 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 SIX4Q9UIU6 781 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 NOCTQ9UK39 431 aaKnown RBP9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 NUB1Q9Y5A7 615 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 PCDHA13Q9Y5I0 950 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 PCNTO95613 3336 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 UMODL1Q5DID0 1318 aa9.55□□□□□ -0.88
CDC42EP3-204ENST00000457889 PDCD11Q14690 1871 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 A0A0A6YYK5 440 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ANO9A1A5B4 782 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 CLSTN1O94985 981 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 CST3P01034 146 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 PLEKP08567 350 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 KRT19P08727 400 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 PAEPP09466 180 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 KRT5P13647 590 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 CYP11B1P15538 503 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ACO1P21399 889 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 TNFAIP3P21580 790 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 LRPAP1P30533 357 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 POLR2BP30876 1174 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 RPL9P32969 192 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 RFC2P35250 354 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 USP8P40818 1118 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 MAGEA1P43355 309 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ASPAP45381 313 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ZNF132P52740 706 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 TNNC1P63316 161 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 CDR2Q01850 454 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 INCA1Q0VD86 236 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 IFI16Q16666 785 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ALKBH5Q6P6C2 394 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 SLC39A5Q6ZMH5 540 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 SLC24A5Q71RS6 500 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ACRBPQ8NEB7 543 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 SLC30A5Q8TAD4 765 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 SEPT8Q92599 483 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 TATDN2Q93075 761 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 C16orf45Q96MC5 204 aaPredicted RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 UROC1Q96N76 676 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 PPP1R10Q96QC0 940 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 AGPAT1Q99943 283 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ELAC1Q9H777 363 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 TRMT1Q9NXH9 659 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 ADAMTS1Q9UHI8 967 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 NENFQ9UMX5 172 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 AGAP1Q9UPQ3 857 aa9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 REXO2Q9Y3B8 237 aaKnown RBP9.54□□□□□ -0.88
CDC42EP3-204ENST00000457889 A0A087X0T9 212 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 ARHGEF37A1IGU5 675 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 USP27XA6NNY8 438 aa9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 DDX3XO00571 662 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDC42EP3-204ENST00000457889 CYP26A1O43174 497 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms