RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SERTAD1Q9UHV2 236 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 TECTAO75443 2155 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 EIF3DO15371 548 aaKnown RBP eCLIP17.56■□□□□ 0.4
CPSF6-203ENST00000456847 LRG1P02750 347 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 ODC1P11926 461 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 AARSP49588 968 aaKnown RBP eCLIP17.56■□□□□ 0.4
CPSF6-203ENST00000456847 EFCAB13Q8IY85 973 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 UBALD2Q8IYN6 164 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 ZSWIM2Q8NEG5 633 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 MYADMQ96S97 322 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 CYP4F11Q9HBI6 524 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 SCN1AP35498 2009 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 DOCK6Q96HP0 2047 aa17.56■□□□□ 0.4
CPSF6-203ENST00000456847 DOCK8Q8NF50 2099 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 ARHGEF37A1IGU5 675 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 EXTL3O43909 919 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 TBC1D4O60343 1298 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 PFKFB1P16118 471 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 NTHL1P78549 312 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 TFAMQ00059 246 aaKnown RBP17.55■□□□□ 0.4
CPSF6-203ENST00000456847 RTL10Q7L3V2 364 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 NT5DC4Q86YG4 428 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 GRAMD1CQ8IYS0 662 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 GPD1LQ8N335 351 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 PBXIP1Q96AQ6 731 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 MFSD14AQ96MC6 490 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 UBE4BO95155 1302 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 A0A1B0GVL5 298 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 KIAA0391O15091 583 aaKnown RBP17.55■□□□□ 0.4
CPSF6-203ENST00000456847 N4BP1O75113 896 aaKnown RBP17.55■□□□□ 0.4
CPSF6-203ENST00000456847 ABLIM3O94929 683 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 PAX3P23760 479 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 TAF6P49848 677 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 LILRA4P59901 499 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 CUL4BQ13620 913 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 TPGS2Q68CL5 300 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 OVOS1Q6IE37 1185 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 SENP8Q96LD8 212 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 SMOC2Q9H3U7 446 aa17.55■□□□□ 0.4
CPSF6-203ENST00000456847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.55■□□□□ 0.4
CPSF6-203ENST00000456847 ANO9A1A5B4 782 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 PIRO00625 290 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 POU2F2P09086 479 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 SLFN14P0C7P3 912 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 ATF2P15336 505 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 TYMPP19971 482 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 CMA1P23946 247 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 ADCY1Q08828 1119 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 SUGP1Q8IWZ8 645 aaKnown RBP17.54■□□□□ 0.4
CPSF6-203ENST00000456847 NELFCDQ8IXH7 590 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 ZNF560Q96MR9 790 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 OXCT2Q9BYC2 517 aaPredicted RBP17.54■□□□□ 0.4
CPSF6-203ENST00000456847 HCFC1R1Q9NWW0 138 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 IGSF9Q9P2J2 1179 aa17.54■□□□□ 0.4
CPSF6-203ENST00000456847 SV2CQ496J9 727 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 PABPC1LQ4VXU2 614 aaKnown RBP17.53■□□□□ 0.4
CPSF6-203ENST00000456847 METTL23Q86XA0 190 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 CACTINQ8WUQ7 758 aaKnown RBP17.53■□□□□ 0.4
CPSF6-203ENST00000456847 SCAND2PQ9GZW5 306 aaPredicted RBP17.53■□□□□ 0.4
CPSF6-203ENST00000456847 KCNK12Q9HB15 430 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 EPS15L1Q9UBC2 864 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 AFF4Q9UHB7 1163 aaKnown RBP17.53■□□□□ 0.4
CPSF6-203ENST00000456847 INSL5Q9Y5Q6 135 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 PVALEFA0A1B0GWK0 134 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 OR6C75A6NL08 312 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 SPTLC1O15269 473 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 ACTN4O43707 911 aaKnown RBP17.53■□□□□ 0.4
CPSF6-203ENST00000456847 OAZ2O95190 189 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 OR4Q2P0C623 313 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 WNT7BP56706 349 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 TDGQ13569 410 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 EPM2AIP1Q7L775 607 aaPredicted RBP17.53■□□□□ 0.4
CPSF6-203ENST00000456847 TCEAL8Q8IYN2 117 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 ELMOD1Q8N336 334 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 ZNF507Q8TCN5 953 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 SLC39A2Q9NP94 309 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 EXOC1Q9NV70 894 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 HSPBP1Q9NZL4 362 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
CPSF6-203ENST00000456847 SEC24AO95486 1093 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 TMEM191BP0C7N4 346 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 POLR2BP30876 1174 aaKnown RBP17.52■□□□□ 0.4
CPSF6-203ENST00000456847 RNF19BQ6ZMZ0 732 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 BMP8AQ7Z5Y6 402 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 ASIC4Q96FT7 647 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 PAGE5Q96GU1 130 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 PGLYRP2Q96PD5 576 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 PDE11AQ9HCR9 933 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 DNMT3BQ9UBC3 853 aaKnown RBP17.52■□□□□ 0.4
CPSF6-203ENST00000456847 DSEQ9UL01 958 aa17.52■□□□□ 0.4
CPSF6-203ENST00000456847 ZNF233A6NK53 670 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 CYB561D2O14569 222 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 ITGB3P05106 788 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 LAMP2P13473 410 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 HOXD13P35453 343 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 PNPLA4P41247 253 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 SYKP43405 635 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 HS2ST1Q7LGA3 356 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 SCFD1Q8WVM8 642 aa17.51■□□□□ 0.39
CPSF6-203ENST00000456847 RSAD2Q8WXG1 361 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms