RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 PAX3P23760 479 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 DNAJB2P25686 324 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 BMPR1AP36894 532 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 BRCC3P46736 316 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 LILRA4P59901 499 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 ELAVL2Q12926 359 aaKnown RBP15.18■□□□□ 0.02
LINC00887-204ENST00000456816 SYCP1Q15431 976 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 SCARA3Q6AZY7 606 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 SPOPLQ6IQ16 392 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 APTXQ7Z2E3 356 aaKnown RBP15.18■□□□□ 0.02
LINC00887-204ENST00000456816 SLC39A11Q8N1S5 342 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 EHBP1Q8NDI1 1231 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 C3orf58Q8NDZ4 430 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 ELMO3Q96BJ8 720 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 IGSF21Q96ID5 467 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 SAMD11Q96NU1 681 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 C17orf80Q9BSJ5 609 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 XPO4Q9C0E2 1151 aaKnown RBP15.18■□□□□ 0.02
LINC00887-204ENST00000456816 MARCH5Q9NX47 278 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 COQ4Q9Y3A0 265 aa15.18■□□□□ 0.02
LINC00887-204ENST00000456816 PDCD11Q14690 1871 aaKnown RBP15.17■□□□□ 0.02
LINC00887-204ENST00000456816 TMEM189-UBE2V1I3L0A0 370 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 CYB561D2O14569 222 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 TEX33O43247 280 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 HUS1O60921 280 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 ASS1P00966 412 aaKnown RBP15.17■□□□□ 0.02
LINC00887-204ENST00000456816 ITGB1P05556 798 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 ODC1P11926 461 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 SLC9A1P19634 815 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 CA8P35219 290 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 TAP1Q03518 808 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 FUT10Q6P4F1 479 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 TRIM65Q6PJ69 517 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 CEP57Q86XR8 500 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 PPM1KQ8N3J5 372 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 KLHL23Q8NBE8 558 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 CXorf38Q8TB03 319 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 SENP8Q96LD8 212 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 C11orf84Q9BUA3 381 aaPredicted RBP15.17■□□□□ 0.02
LINC00887-204ENST00000456816 NIF3L1Q9GZT8 377 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 XYLT2Q9H1B5 865 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 CERS4Q9HA82 394 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 POLIQ9UNA4 740 aa15.17■□□□□ 0.02
LINC00887-204ENST00000456816 TRIP11Q15643 1979 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 SPTLC1O15269 473 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 LRRN2O75325 713 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 FGF18O76093 207 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 ARHGEF15O94989 841 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 CSPG5O95196 566 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 STAU1O95793 577 aaKnown RBP15.16■□□□□ 0.02
LINC00887-204ENST00000456816 IGFBP6P24592 240 aaPredicted RBP15.16■□□□□ 0.02
LINC00887-204ENST00000456816 PON1P27169 355 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 NR1I3Q14994 352 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 TIGD5Q53EQ6 642 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 FAM171A1Q5VUB5 890 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 KIAA1841Q6NSI8 718 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 SARM1Q6SZW1 724 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 TMEM173Q86WV6 379 aaPredicted RBP15.16■□□□□ 0.02
LINC00887-204ENST00000456816 METTL23Q86XA0 190 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 APPL2Q8NEU8 664 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 NEK11Q8NG66 645 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 BCL7CQ8WUZ0 217 aaPredicted RBP15.16■□□□□ 0.02
LINC00887-204ENST00000456816 ARNTL2Q8WYA1 636 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 PLVAPQ9BX97 442 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 GRPEL1Q9HAV7 217 aa15.16■□□□□ 0.02
LINC00887-204ENST00000456816 FAM207AQ9NSI2 230 aaPredicted RBP15.16■□□□□ 0.02
LINC00887-204ENST00000456816 PUF60Q9UHX1 559 aaKnown RBP15.16■□□□□ 0.02
LINC00887-204ENST00000456816 RB1P06400 928 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 TBXAS1P24557 533 aaPredicted RBP15.15■□□□□ 0.02
LINC00887-204ENST00000456816 KLK7P49862 253 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 ERVK-21P61565 698 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 GSE1Q14687 1217 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 LRIT3Q3SXY7 679 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 RRAGAQ7L523 313 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 TATDN2Q93075 761 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 SUSD3Q96L08 255 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 ERGIC2Q96RQ1 377 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 GPR62Q9BZJ7 368 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 SNX25Q9H3E2 840 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 SMYD3Q9H7B4 428 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 VRTNQ9H8Y1 702 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 APOBEC3GQ9HC16 384 aaKnown RBP15.15■□□□□ 0.02
LINC00887-204ENST00000456816 UBE2TQ9NPD8 197 aaPredicted RBP15.15■□□□□ 0.02
LINC00887-204ENST00000456816 GDAP2Q9NXN4 497 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 APEX2Q9UBZ4 518 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 STK39Q9UEW8 545 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 DSEQ9UL01 958 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 PCDHB8Q9UN66 801 aa15.15■□□□□ 0.02
LINC00887-204ENST00000456816 A0A1W2PQC6 194 aa15.14■□□□□ 0.01
LINC00887-204ENST00000456816 LINC00271P0C7V0 271 aa15.14■□□□□ 0.01
LINC00887-204ENST00000456816 TRIM21P19474 475 aaKnown RBP15.14■□□□□ 0.01
LINC00887-204ENST00000456816 TKTP29401 623 aaKnown RBP15.14■□□□□ 0.01
LINC00887-204ENST00000456816 RAP1GAPP47736 663 aa15.14■□□□□ 0.01
LINC00887-204ENST00000456816 AARSP49588 968 aaKnown RBP eCLIP15.14■□□□□ 0.01
LINC00887-204ENST00000456816 MFAP3P55082 362 aa15.14■□□□□ 0.01
LINC00887-204ENST00000456816 YWHAEP62258 255 aaKnown RBP15.14■□□□□ 0.01
LINC00887-204ENST00000456816 APBA1Q02410 837 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms