RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LBHD1Q9BQE6 289 aaPredicted RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 TARS2Q9BW92 718 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 CNOT10Q9H9A5 744 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 SLC24A3Q9HC58 644 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 ANKFY1Q9P2R3 1169 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 NOCTQ9UK39 431 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 EXOC7Q9UPT5 735 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 ZNFX1Q9P2E3 1918 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 MGRN1O60291 552 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 PIAS1O75925 651 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 ATG7O95352 703 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 CHRM1P11229 460 aaPredicted RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 EDNRBP24530 442 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 ANXA13P27216 316 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 CYP24A1Q07973 514 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 CNGA2Q16280 664 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 KYNUQ16719 465 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 SEL1L2Q5TEA6 688 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 SLC13A5Q86YT5 568 aaPredicted RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 PGM2Q96G03 612 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 TACO1Q9BSH4 297 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 DHX33Q9H6R0 707 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 KCNK9Q9NPC2 374 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
LINC00959-201ENST00000456581 R3HDM2Q9Y2K5 976 aaKnown RBP13.22□□□□□ -0.29
LINC00959-201ENST00000456581 FAM187AA6NFU0 413 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 SRRM3A6NNA2 597 aaPredicted RBP13.21□□□□□ -0.29
LINC00959-201ENST00000456581 STAM2O75886 525 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 CHRNA3P32297 505 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 GJC1P36383 396 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 LIG4P49917 911 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 STAT5BP51692 787 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 FMO1Q01740 532 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 KRT17Q04695 432 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 NEDD9Q14511 834 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 LACTB2Q53H82 288 aaPredicted RBP13.21□□□□□ -0.29
LINC00959-201ENST00000456581 SPOPLQ6IQ16 392 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 PIGWQ7Z7B1 504 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 AGAP11Q8TF27 550 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 NAP1L3Q99457 506 aaPredicted RBP13.21□□□□□ -0.29
LINC00959-201ENST00000456581 AGTPBP1Q9UPW5 1226 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 STK38LQ9Y2H1 464 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 EVPLQ92817 2033 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 TMEM120BA0PK00 339 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 GJB6O95452 261 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 KRT39Q6A163 491 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 SLC17A8Q8NDX2 589 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 CD101Q93033 1021 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 KLHL11Q9NVR0 708 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 FBXO40Q9UH90 709 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 ASIC3Q9UHC3 531 aa13.21□□□□□ -0.29
LINC00959-201ENST00000456581 PSEN1P49768 467 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 MAP1SQ66K74 1059 aaPredicted RBP13.21□□□□□ -0.3
LINC00959-201ENST00000456581 GPAT2Q6NUI2 795 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 TRPM8Q7Z2W7 1104 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 CDR2LQ86X02 465 aaPredicted RBP13.21□□□□□ -0.3
LINC00959-201ENST00000456581 RHOT2Q8IXI1 618 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 GPD1LQ8N335 351 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 HELQQ8TDG4 1101 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 KCNV2Q8TDN2 545 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 SLC7A3Q8WY07 619 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 ARHGEF2Q92974 986 aaKnown RBP13.21□□□□□ -0.3
LINC00959-201ENST00000456581 RMDN2Q96LZ7 410 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 MFSD14AQ96MC6 490 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 FBXL18Q96ME1 805 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 KDM4CQ9H3R0 1056 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.3
LINC00959-201ENST00000456581 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 NF2P35240 595 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 MGAT5Q09328 741 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
LINC00959-201ENST00000456581 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 TLDC1Q6P9B6 456 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 VSTM1Q6UX27 236 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 CAPN12Q6ZSI9 719 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 NSMCE1Q8WV22 266 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 ART4Q93070 314 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 MTRF1LQ9UGC7 380 aaKnown RBP13.2□□□□□ -0.3
LINC00959-201ENST00000456581 SLC12A4Q9UP95 1085 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 IGKV6D-21A0A0A0MT36 114 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 K7ERI5 159 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 DKC1O60832 514 aaKnown RBP eCLIP13.2□□□□□ -0.3
LINC00959-201ENST00000456581 CFHP08603 1231 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 KRT16P08779 473 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 SRGAP2CP0DJJ0 459 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 MYBL1P10243 752 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 CAPSQ13938 189 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 C11orf63Q6NUN7 778 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 CRELD2Q6UXH1 353 aaPredicted RBP13.2□□□□□ -0.3
LINC00959-201ENST00000456581 TMEM130Q8N3G9 435 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 ANKS4BQ8N8V4 417 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 CCDC63Q8NA47 563 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 DEPTORQ8TB45 409 aa13.2□□□□□ -0.3
LINC00959-201ENST00000456581 CPA5Q8WXQ8 436 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms