RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TBC1D7Q9P0N9 293 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 PIEZO1Q92508 2521 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 ANK1P16157 1881 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 KMT2EQ8IZD2 1858 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 TISP43B9A030 160 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 AVPR2P30518 371 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 ME1P48163 572 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 LILRA4P59901 499 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 C9orf57Q5W0N0 161 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 SHC4Q6S5L8 630 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 ELMOD1Q8N336 334 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 SMOC2Q9H3U7 446 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 FBXL21Q9UKT6 434 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 DSEQ9UL01 958 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 INSL5Q9Y5Q6 135 aa19.35■□□□□ 0.69
MSH6-207ENST00000456246 ANO9A1A5B4 782 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 PIRO00625 290 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 SRFP11831 508 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 PTPN2P17706 415 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 GUCY2FP51841 1108 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 CASP5P51878 434 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 PTPN5P54829 565 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 KCNA1Q09470 495 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 HTR4Q13639 388 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 MYBPC2Q14324 1141 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 OVOS1Q6IE37 1185 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 CRELD2Q6UXH1 353 aaPredicted RBP19.34■□□□□ 0.69
MSH6-207ENST00000456246 BRSK2Q8IWQ3 736 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 SLC44A3Q8N4M1 653 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 LEMD2Q8NC56 503 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 FGF13Q92913 245 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 IRF2BPLQ9H1B7 796 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 DNMT3BQ9UBC3 853 aaKnown RBP19.34■□□□□ 0.69
MSH6-207ENST00000456246 WNT16Q9UBV4 365 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 MRPS23Q9Y3D9 190 aaKnown RBP19.34■□□□□ 0.69
MSH6-207ENST00000456246 DOCK6Q96HP0 2047 aa19.34■□□□□ 0.69
MSH6-207ENST00000456246 ZNF197O14709 1029 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 EIF3DO15371 548 aaKnown RBP eCLIP19.33■□□□□ 0.68
MSH6-207ENST00000456246 RHOP08100 348 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 PNPLA4P41247 253 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 TAF6P49848 677 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 CLCN5P51795 746 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 ASIC1P78348 528 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 NTHL1P78549 312 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 ADCY1Q08828 1119 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 PLD1Q13393 1074 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 SENP8Q96LD8 212 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 ZNF560Q96MR9 790 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 FAM213AQ9BRX8 229 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 DPP3Q9NY33 737 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 GDE1Q9NZC3 331 aa19.33■□□□□ 0.68
MSH6-207ENST00000456246 EXTL3O43909 919 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 MICAL2O94851 1124 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 PDGFBP01127 241 aaPredicted RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 CYP11A1P05108 521 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 VCPP55072 806 aaKnown RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 GPR17Q13304 367 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 FOXD4L6Q3SYB3 417 aaPredicted RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 RESP18Q5W5W9 173 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 ASTLQ6HA08 431 aaPredicted RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 IQCEQ6IPM2 695 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 ARMCX5Q6P1M9 558 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 FOXD4L3Q6VB84 417 aaPredicted RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 NPAS3Q8IXF0 933 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 ITFG1Q8TB96 612 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 CACTINQ8WUQ7 758 aaKnown RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 RSAD2Q8WXG1 361 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 C7orf25Q9BPX7 421 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 IKZF4Q9H2S9 585 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 HCFC1R1Q9NWW0 138 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 RBAKQ9NYW8 714 aaPredicted RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 PCDHA7Q9UN72 937 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 TIMM13Q9Y5L4 95 aaPredicted RBP19.32■□□□□ 0.68
MSH6-207ENST00000456246 NUMBLQ9Y6R0 609 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 CACNA1HO95180 2353 aa19.32■□□□□ 0.68
MSH6-207ENST00000456246 UBE4BO95155 1302 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 PPEF2O14830 753 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 POLR2DO15514 142 aaKnown RBP19.31■□□□□ 0.68
MSH6-207ENST00000456246 PRPF6O94906 941 aaKnown RBP19.31■□□□□ 0.68
MSH6-207ENST00000456246 SEC24AO95486 1093 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 NHLH1Q02575 133 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 DNM1Q05193 864 aaKnown RBP19.31■□□□□ 0.68
MSH6-207ENST00000456246 PKP1Q13835 747 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 SV2CQ496J9 727 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 UNC13DQ70J99 1090 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 METTL23Q86XA0 190 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 EFCAB13Q8IY85 973 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 SLC2A4RGQ9NR83 387 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 HSFX1Q9UBD0 423 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 RCOR1Q9UKL0 485 aa19.31■□□□□ 0.68
MSH6-207ENST00000456246 SNRPFP62306 86 aaKnown RBP19.3■□□□□ 0.68
MSH6-207ENST00000456246 SMARCB1Q12824 385 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 FAM26FQ5R3K3 315 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 IER5LQ5T953 404 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 CYP4A22Q5TCH4 519 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 RNF19BQ6ZMZ0 732 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 PDZD4Q76G19 769 aaPredicted RBP19.3■□□□□ 0.68
MSH6-207ENST00000456246 SIX5Q8N196 739 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 GPD1LQ8N335 351 aa19.3■□□□□ 0.68
MSH6-207ENST00000456246 SPRYD3Q8NCJ5 442 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms