RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 KIAA1586Q9HCI6 787 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 HSPBP1Q9NZL4 362 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 SCN1AP35498 2009 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 NOTCH4Q99466 2003 aa18.78■□□□□ 0.6
USP39-208ENST00000455732 M0QZQ0 153 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 PIRO00625 290 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 RHOBTB3O94955 611 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 WNT7BP56706 349 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 FAM160A1Q05DH4 1040 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 SNW1Q13573 536 aaKnown RBP18.77■□□□□ 0.6
USP39-208ENST00000455732 RAB33AQ14088 237 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 MRPL58Q14197 206 aaKnown RBP18.77■□□□□ 0.6
USP39-208ENST00000455732 VARS2Q5ST30 1063 aaKnown RBP18.77■□□□□ 0.6
USP39-208ENST00000455732 C9orf57Q5W0N0 161 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 NELFCDQ8IXH7 590 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 TMEM130Q8N3G9 435 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 APPL2Q8NEU8 664 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 ENGASEQ8NFI3 743 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 GOLGA5Q8TBA6 731 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 TMEM174Q8WUU8 243 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 ZDHHC7Q9NXF8 308 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 CHMP5Q9NZZ3 219 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 FBXW11Q9UKB1 542 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 PCDHB8Q9UN66 801 aa18.77■□□□□ 0.6
USP39-208ENST00000455732 GOLGA8IPA6NC78 632 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 GOLGA8JA6NMD2 632 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 TBC1D4O60343 1298 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 ZMYND10O75800 440 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 ZXDAP98168 799 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 KCNB1Q14721 858 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 SLC8B1Q6J4K2 584 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 RSPO2Q6UXX9 243 aaPredicted RBP18.76■□□□□ 0.59
USP39-208ENST00000455732 CCDC149Q6ZUS6 474 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 ZDHHC14Q8IZN3 488 aa18.76■□□□□ 0.59
USP39-208ENST00000455732 CCDC47Q96A33 483 aaKnown RBP18.76■□□□□ 0.59
USP39-208ENST00000455732 ZDBF2Q9HCK1 2354 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 ZNF233A6NK53 670 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 H7C4K7 107 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 PPEF2O14830 753 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
USP39-208ENST00000455732 OR1D2P34982 312 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 LILRA4P59901 499 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 PTPN21Q16825 1174 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 CBWD2Q8IUF1 395 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 TDRD5Q8NAT2 981 aaKnown RBP18.75■□□□□ 0.59
USP39-208ENST00000455732 SMG7Q92540 1137 aaKnown RBP18.75■□□□□ 0.59
USP39-208ENST00000455732 TIGD1Q96MW7 591 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 PRKD2Q9BZL6 878 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 WDR6Q9NNW5 1121 aaKnown RBP18.75■□□□□ 0.59
USP39-208ENST00000455732 DPP3Q9NY33 737 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 CDY1Q9Y6F8 540 aa18.75■□□□□ 0.59
USP39-208ENST00000455732 TYMPP19971 482 aa18.74■□□□□ 0.59
USP39-208ENST00000455732 SURF1Q15526 300 aa18.74■□□□□ 0.59
USP39-208ENST00000455732 SNRNP35Q16560 246 aaKnown RBP18.74■□□□□ 0.59
USP39-208ENST00000455732 ZNF280DQ6N043 979 aa18.74■□□□□ 0.59
USP39-208ENST00000455732 RTL10Q7L3V2 364 aa18.74■□□□□ 0.59
USP39-208ENST00000455732 PLCD3Q8N3E9 789 aa18.74■□□□□ 0.59
USP39-208ENST00000455732 XXYLT1Q8NBI6 393 aa18.74■□□□□ 0.59
USP39-208ENST00000455732 CACTINQ8WUQ7 758 aaKnown RBP18.74■□□□□ 0.59
USP39-208ENST00000455732 OXCT2Q9BYC2 517 aaPredicted RBP18.74■□□□□ 0.59
USP39-208ENST00000455732 PIEZO1Q92508 2521 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 TSC2P49815 1807 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 ARHGEF37A1IGU5 675 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 CLIC2O15247 247 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 SPTLC1O15269 473 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 N4BP1O75113 896 aaKnown RBP18.73■□□□□ 0.59
USP39-208ENST00000455732 OAZ2O95190 189 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 KIF20AO95235 890 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 POU2F2P09086 479 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 TFAMQ00059 246 aaKnown RBP18.73■□□□□ 0.59
USP39-208ENST00000455732 TRIM67Q6ZTA4 783 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 OTOP3Q7RTS5 596 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 SLC9A9Q8IVB4 645 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 C1orf127Q8N9H9 656 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 CXorf38Q8TB03 319 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
USP39-208ENST00000455732 ZNF560Q96MR9 790 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 KCTD10Q9H3F6 313 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 PDE11AQ9HCR9 933 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 FBXL5Q9UKA1 691 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 ITGA11Q9UKX5 1188 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 CLUHO75153 1309 aa18.73■□□□□ 0.59
USP39-208ENST00000455732 PDXKO00764 312 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 C8AP07357 584 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 ODC1P11926 461 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 HOXA9P31269 272 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 PNPLA4P41247 253 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 TAF6P49848 677 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 CYP2J2P51589 502 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 ROR1Q01973 937 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 YWHAHQ04917 246 aaPredicted RBP18.72■□□□□ 0.59
USP39-208ENST00000455732 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 LIN9Q5TKA1 542 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 DSTYKQ6XUX3 929 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 HFE2Q6ZVN8 426 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 WDR49Q8IV35 697 aa18.72■□□□□ 0.59
USP39-208ENST00000455732 ELOA2Q8IYF1 753 aaPredicted RBP18.72■□□□□ 0.59
USP39-208ENST00000455732 ACSF2Q96CM8 615 aaPredicted RBP18.72■□□□□ 0.59
USP39-208ENST00000455732 SENP8Q96LD8 212 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms