RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 ZNF667Q5HYK9 610 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 TMEM240Q5SV17 173 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 PSRC1Q6PGN9 363 aaPredicted RBP17.88■□□□□ 0.45
LINC00963-208ENST00000454968 CD300LGQ6UXG3 332 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 RRAGAQ7L523 313 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 IRF2BP2Q7Z5L9 587 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 FMNL3Q8IVF7 1028 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 COLGALT2Q8IYK4 626 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 URGCPQ8TCY9 931 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 ZNF560Q96MR9 790 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 ARID3AQ99856 593 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 MRPL9Q9BYD2 267 aaKnown RBP17.88■□□□□ 0.45
LINC00963-208ENST00000454968 CYP3A43Q9HB55 503 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 CCDC85CA6NKD9 419 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 FOXN3O00409 490 aaPredicted RBP17.87■□□□□ 0.45
LINC00963-208ENST00000454968 SPTLC1O15269 473 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 DDHD2O94830 711 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 AMHP03971 560 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 FAM163BP0C2L3 166 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 SOX5P35711 763 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 CLCNKBP51801 687 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 LILRA4P59901 499 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 DEFB103AP81534 67 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 CCZ1BP86790 482 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 CCZ1P86791 482 aaPredicted RBP17.87■□□□□ 0.45
LINC00963-208ENST00000454968 MYO1EQ12965 1108 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 RASIP1Q5U651 963 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 HGSNATQ68CP4 663 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 HERVK_113Q902F9 699 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 ELMO3Q96BJ8 720 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 KCNF1Q9H3M0 494 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 LRFN2Q9ULH4 789 aa17.87■□□□□ 0.45
LINC00963-208ENST00000454968 PODXLO00592 558 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 FGBP02675 491 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 STAT1P42224 750 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 TAF6P49848 677 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 ZNF132P52740 706 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 INCA1Q0VD86 236 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 WDR72Q3MJ13 1102 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 ZNF365Q70YC5 407 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 DPH6Q7L8W6 267 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 ZNF280BQ86YH2 543 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 C3orf58Q8NDZ4 430 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 CCDC112Q8NEF3 446 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 SPAG5Q96R06 1193 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC00963-208ENST00000454968 PAAF1Q9BRP4 392 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 SYT11Q9BT88 431 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
LINC00963-208ENST00000454968 KPNA7A9QM74 516 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 P4HA1P13674 534 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 GATMP50440 423 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 RAPGEF1Q13905 1077 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 SV2CQ496J9 727 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 SFMBT2Q5VUG0 894 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 ABI1Q8IZP0 508 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 TNS4Q8IZW8 715 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 TMEM175Q9BSA9 504 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 SDCBP2Q9H190 292 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 NRDE2Q9H7Z3 1164 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 PCDH10Q9P2E7 1040 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 POLIQ9UNA4 740 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 KIAA1671Q9BY89 1806 aa17.85■□□□□ 0.45
LINC00963-208ENST00000454968 TULP1O00294 542 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-208ENST00000454968 TACC1O75410 805 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 PTMAP06454 111 aaKnown RBP17.84■□□□□ 0.45
LINC00963-208ENST00000454968 FERP16591 822 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 IGFBP6P24592 240 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-208ENST00000454968 HTRA4P83105 476 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-208ENST00000454968 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-208ENST00000454968 DCLRE1AQ6PJP8 1040 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 OTOP2Q7RTS6 562 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 LRRC43Q8N309 656 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 TTC39CQ8N584 583 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 OLIG1Q8TAK6 271 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 BAG1Q99933 345 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-208ENST00000454968 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.84■□□□□ 0.451e-6■■■■■ 93.7
LINC00963-208ENST00000454968 ARHGAP20Q9P2F6 1191 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
LINC00963-208ENST00000454968 VWA8A3KMH1 1905 aa17.84■□□□□ 0.45
LINC00963-208ENST00000454968 SSU72P8A0A1W2PR75 194 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 CASTOR2A6NHX0 329 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 EFEMP2O95967 443 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 SYN1P17600 705 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 CLCN1P35523 988 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 ARHGAP44Q17R89 818 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 SOWAHAQ2M3V2 549 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 ASTE1Q2TB18 679 aaPredicted RBP17.83■□□□□ 0.45
LINC00963-208ENST00000454968 TMTC1Q8IUR5 882 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 CMTR2Q8IYT2 770 aaKnown RBP17.83■□□□□ 0.45
LINC00963-208ENST00000454968 TOP6BLQ8N6T0 577 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 SPATA18Q8TC71 538 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 PHOSPHO2Q8TCD6 241 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 SMYD3Q9H7B4 428 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 CISHQ9NSE2 258 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 CACNG4Q9UBN1 327 aa17.83■□□□□ 0.45
LINC00963-208ENST00000454968 ZMYND8Q9ULU4 1186 aaPredicted RBP17.83■□□□□ 0.45
LINC00963-208ENST00000454968 BZW2Q9Y6E2 419 aaKnown RBP17.83■□□□□ 0.45
LINC00963-208ENST00000454968 TNRC18O15417 2968 aaPredicted RBP17.83■□□□□ 0.44
LINC00963-208ENST00000454968 M0QZQ0 153 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms