RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ATICP31939 592 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 GCLMP48507 274 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 AARSP49588 968 aaKnown RBP eCLIP15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 CREMQ03060 361 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 ZSCAN23Q3MJ62 389 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 ZACNQ401N2 412 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 C1orf220Q5T0J3 134 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 TDRD10Q5VZ19 366 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 KRT39Q6A163 491 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 SV2AQ7L0J3 742 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 METTL23Q86XA0 190 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 CXorf38Q8TB03 319 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 HPDLQ96IR7 371 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 FAM84AQ96KN4 292 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 SENP8Q96LD8 212 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 DNAJC25Q9H1X3 360 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 TLE6Q9H808 572 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 TMEM8AQ9HCN3 771 aa15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 RANBP2P49792 3224 aaKnown RBP15.73■□□□□ 0.11
NCKIPSD-207ENST00000453349 C2orf71A6NGG8 1288 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 H7C4K7 107 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 CYB561D2O14569 222 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 SPTLC1O15269 473 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 CLSTN1O94985 981 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 ODC1P11926 461 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 TKTP29401 623 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 MARSP56192 900 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 PPP3CAQ08209 521 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 PTPN14Q15678 1187 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 CCDC85BQ15834 202 aaPredicted RBP15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 SGSM1Q2NKQ1 1148 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 ANO6Q4KMQ2 910 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 C11orf57Q6ZUT1 292 aaPredicted RBP15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 ANKS3Q6ZW76 656 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 RBM23Q86U06 439 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 B3GALT6Q96L58 329 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 DSEQ9UL01 958 aa15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.72■□□□□ 0.11
NCKIPSD-207ENST00000453349 FSD2A1L4K1 749 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 SMTNL1A8MU46 457 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 HIDE1A8MVS5 230 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 HUS1O60921 280 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 LILRB3O75022 631 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 TYMPP19971 482 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 KLRC2P26717 231 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 PIK3CAP42336 1068 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 MTIF2P46199 727 aaKnown RBP15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 MYL6P60660 151 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 YWHAHQ04917 246 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 CETN1Q12798 172 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 NCOA4Q13772 614 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 PSMD5Q16401 504 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 TCEAL5Q5H9L2 206 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 RTP2Q5QGT7 225 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 SCARA3Q6AZY7 606 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 PRSS55Q6UWB4 352 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 C15orf39Q6ZRI6 1047 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 ADGRD2Q7Z7M1 963 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 CCDC150Q8NCX0 1101 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 LNX1Q8TBB1 728 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 PIK3R5Q8WYR1 880 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 SLC35C1Q96A29 364 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 CNOT6LQ96LI5 555 aaKnown RBP15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 CDCA3Q99618 268 aaPredicted RBP15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 IMPG2Q9BZV3 1241 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 IGFLR1Q9H665 355 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 RXFP1Q9HBX9 757 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 GDAP2Q9NXN4 497 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 FNIP2Q9P278 1114 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 STXBP5LQ9Y2K9 1186 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 NFE2L3Q9Y4A8 694 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 PCDHGC5Q9Y5F6 944 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 SNX9Q9Y5X1 595 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 TRIOBPQ9H2D6 2365 aa15.71■□□□□ 0.11
NCKIPSD-207ENST00000453349 PER2O15055 1255 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 NCK2O43639 380 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 N4BP1O75113 896 aaKnown RBP15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 VNN1O95497 513 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 STAU1O95793 577 aaKnown RBP15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 HLA-DRAP01903 254 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 NRIP1P48552 1158 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 MXI1P50539 228 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 TNNC1P63316 161 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 MYL5Q02045 173 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 WDR72Q3MJ13 1102 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 VARS2Q5ST30 1063 aaKnown RBP15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 DPH6Q7L8W6 267 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 PPFIBP1Q86W92 1011 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 TRIM59Q8IWR1 403 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 THEM5Q8N1Q8 247 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 TAF4BQ92750 862 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 KLHL5Q96PQ7 755 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 MMS19Q96T76 1030 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 BPIFA3Q9BQP9 254 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 FUCA2Q9BTY2 467 aa15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 OXCT2Q9BYC2 517 aaPredicted RBP15.7■□□□□ 0.1
NCKIPSD-207ENST00000453349 TIMM13Q9Y5L4 95 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms