RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 OAZ2O95190 189 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 GCNT3O95395 438 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 SEC24AO95486 1093 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 RHOP08100 348 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 NPR3P17342 541 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
CHD3-206ENST00000452447 TMEM132DQ14C87 1099 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 CWF19L1Q69YN2 538 aaKnown RBP13.98□□□□□ -0.17
CHD3-206ENST00000452447 IQCEQ6IPM2 695 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 NPAS3Q8IXF0 933 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 PDILTQ8N807 584 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 LINC00301Q8NCQ3 95 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 GPR152Q8TDT2 470 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 ING5Q8WYH8 240 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 DNAJC19Q96DA6 116 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 CORO1BQ9BR76 489 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 ASB7Q9H672 318 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 MAFFQ9ULX9 164 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 DERAQ9Y315 318 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 INSL5Q9Y5Q6 135 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 STYXL1Q9Y6J8 313 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 TCHHQ07283 1943 aa13.98□□□□□ -0.17
CHD3-206ENST00000452447 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
CHD3-206ENST00000452447 SPTLC2O15270 562 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 NFICP08651 508 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
CHD3-206ENST00000452447 PAX3P23760 479 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 AARSP49588 968 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHD3-206ENST00000452447 LILRA4P59901 499 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 CYP4A22Q5TCH4 519 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 SYCP3Q8IZU3 236 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 ZNF512Q96ME7 567 aaPredicted RBP13.97□□□□□ -0.17
CHD3-206ENST00000452447 RPP25Q9BUL9 199 aaKnown RBP13.97□□□□□ -0.17
CHD3-206ENST00000452447 SLC2A4RGQ9NR83 387 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 GDE1Q9NZC3 331 aa13.97□□□□□ -0.17
CHD3-206ENST00000452447 TFIP11Q9UBB9 837 aaKnown RBP13.97□□□□□ -0.17
CHD3-206ENST00000452447 KRBA1A5PL33 1030 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 OR6C75A6NL08 312 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 ZNF197O14709 1029 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 PI15O43692 258 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 PPP1R37O75864 691 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 ODC1P11926 461 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 POU5F1Q01860 360 aaKnown RBP13.96□□□□□ -0.17
CHD3-206ENST00000452447 L1TD1Q5T7N2 865 aaKnown RBP13.96□□□□□ -0.17
CHD3-206ENST00000452447 C9orf57Q5W0N0 161 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 OVOS1Q6IE37 1185 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 RNF19BQ6ZMZ0 732 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 PDZD4Q76G19 769 aaPredicted RBP13.96□□□□□ -0.17
CHD3-206ENST00000452447 MCRS1Q96EZ8 462 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 ACCSQ96QU6 501 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 PHOX2BQ99453 314 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 AVENQ9NQS1 362 aaPredicted RBP13.96□□□□□ -0.17
CHD3-206ENST00000452447 ARHGEF3Q9NR81 526 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 OLFML3Q9NRN5 406 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 PANK4Q9NVE7 773 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 FAM86C1Q9NVL1 165 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 C2CD2Q9Y426 696 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 F5P12259 2224 aa13.96□□□□□ -0.17
CHD3-206ENST00000452447 A0A087X0B3 334 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 PPEF2O14830 753 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 PPP6R2O75170 966 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 TYMPP19971 482 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 ADSSP30520 456 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 GPC5P78333 572 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 KCNA1Q09470 495 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 TWF1Q12792 350 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 ALCAMQ13740 583 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 SLC5A9Q2M3M2 681 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 FOXD4L5Q5VV16 416 aaPredicted RBP13.96□□□□□ -0.18
CHD3-206ENST00000452447 ARMCX5Q6P1M9 558 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 CCDC65Q8IXS2 484 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 FOXD4L4Q8WXT5 416 aaPredicted RBP13.96□□□□□ -0.18
CHD3-206ENST00000452447 SENP8Q96LD8 212 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 KXD1Q9BQD3 176 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 STRA6Q9BX79 667 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 LRRC27Q9C0I9 530 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 TBC1D17Q9HA65 648 aa13.96□□□□□ -0.18
CHD3-206ENST00000452447 FAM186AA6NE01 2351 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 CACNA1IQ9P0X4 2223 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 PIRO00625 290 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 IL18RAPO95256 599 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 LDHAP00338 332 aaKnown RBP13.95□□□□□ -0.18
CHD3-206ENST00000452447 PLD1Q13393 1074 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 NT5DC4Q86YG4 428 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 SHDQ96IW2 340 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 PGLYRP2Q96PD5 576 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 FAM213AQ9BRX8 229 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 TMEM206Q9H813 350 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 DPP3Q9NY33 737 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 DSEQ9UL01 958 aa13.95□□□□□ -0.18
CHD3-206ENST00000452447 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 FRMD3A2A2Y4 597 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 SPTLC1O15269 473 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 YEATS4O95619 227 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 OR4Q2P0C623 313 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 CEBPBP17676 345 aa13.94□□□□□ -0.18
CHD3-206ENST00000452447 TAF6P49848 677 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms