RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 SWT1Q5T5J6 900 aaKnown RBP11.83□□□□□ -0.52
DDR1-239ENST00000452441 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 YTHDF3Q7Z739 585 aaKnown RBP11.83□□□□□ -0.52
DDR1-239ENST00000452441 ERICH1Q86X53 443 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 DAW1Q8N136 415 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 PSPC1Q8WXF1 523 aaKnown RBP11.83□□□□□ -0.52
DDR1-239ENST00000452441 CFAP36Q96G28 342 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 HEXIM2Q96MH2 286 aaKnown RBP11.83□□□□□ -0.52
DDR1-239ENST00000452441 KREMEN1Q96MU8 473 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 CAMKK2Q96RR4 588 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDR1-239ENST00000452441 FRMPD4Q14CM0 1322 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 BTNL10A8MVZ5 291 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 CHUKO15111 745 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 GH1P01241 217 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
DDR1-239ENST00000452441 OR6B2Q6IFH4 312 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 UBA3Q8TBC4 463 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 CARD9Q9H257 536 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 PABPC3Q9H361 631 aaKnown RBP11.83□□□□□ -0.52
DDR1-239ENST00000452441 LTBP4Q8N2S1 1624 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 ALCAMQ13740 583 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 AGBL2Q5U5Z8 902 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 TTC27Q6P3X3 843 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 KCTD6Q8NC69 237 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 SLC13A1Q9BZW2 595 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 YY1AP1Q9H869 796 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 KIF9Q9HAQ2 790 aa11.83□□□□□ -0.52
DDR1-239ENST00000452441 MARCOQ9UEW3 520 aaPredicted RBP11.83□□□□□ -0.52
DDR1-239ENST00000452441 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 PLIN4Q96Q06 1357 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 MIF4GDA9UHW6 222 aaKnown RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 PODXLO00592 558 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 IRF6O14896 467 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 NRLP54845 237 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 DCAF12L1Q5VU92 463 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 RBBP8NLQ8NC74 664 aaPredicted RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 PARD3BQ8TEW8 1205 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 BSNDQ8WZ55 320 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 HES6Q96HZ4 224 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 OSBPL8Q9BZF1 889 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 TRIM33Q9UPN9 1127 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 R3HDM2Q9Y2K5 976 aaKnown RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 RPL7AP62424 266 aaKnown RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 NCOA4Q13772 614 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 ANO5Q75V66 913 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 N4BP2L2Q92802 583 aaPredicted RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 ATXN7L3BQ96GX2 97 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 ACTR5Q9H9F9 607 aaPredicted RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 ATXN2Q99700 1313 aaKnown RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 PIK3CDO00329 1044 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 SUN1O94901 812 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 SCTRP47872 440 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 FKBP1AP62942 108 aaKnown RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 ANKRD20A8PQ5CZ79 823 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 CYB5D1Q6P9G0 228 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 EPM2AIP1Q7L775 607 aaPredicted RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 HIPK4Q8NE63 616 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 LRRC8CQ8TDW0 803 aa11.82□□□□□ -0.52
DDR1-239ENST00000452441 PRPF31Q8WWY3 499 aaKnown RBP11.82□□□□□ -0.52
DDR1-239ENST00000452441 DESP17661 470 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 SLMAPQ14BN4 828 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 EMC10Q5UCC4 262 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 C6orf89Q6UWU4 347 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 CEP120Q8N960 986 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 AGR3Q8TD06 166 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 PLEKHO2Q8TD55 490 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 PYROXD1Q8WU10 500 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 SMC6Q96SB8 1091 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 MMP19Q99542 508 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 MKNK1Q9BUB5 465 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 F8VP50 259 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
DDR1-239ENST00000452441 JAM2P57087 298 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 PTENP60484 403 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 ADCY2Q08462 1091 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 KRT81Q14533 505 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 ZNF699Q32M78 642 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 DPY19L2P1Q6NXN4 242 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 RASGEF1CQ8N431 466 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 PRCCQ92733 491 aaPredicted RBP11.81□□□□□ -0.52
DDR1-239ENST00000452441 RILPQ96NA2 401 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
DDR1-239ENST00000452441 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 ETNK1Q9HBU6 452 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 STXBP5LQ9Y2K9 1186 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 ARFGEF1Q9Y6D6 1849 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 UMODL1Q5DID0 1318 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 ZNF541Q9H0D2 1346 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 SMCHD1A6NHR9 2005 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 DCAF8L1A6NGE4 600 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 H0YCG3 227 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 NFKBIEO00221 500 aa11.81□□□□□ -0.52
DDR1-239ENST00000452441 DSG3P32926 999 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms