RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 HSPA9P38646 679 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 MDH1P40925 334 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 STAT5AP42229 794 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 PIP4K2AP48426 406 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 TDO2P48775 406 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 VAV2P52735 878 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 STX17P56962 302 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 HAND2P61296 217 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 TIMM10P62072 90 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 IRX1P78414 480 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 HDLBPQ00341 1268 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 SSRP1Q08945 709 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ITGB3BPQ13352 177 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 PDCLQ13371 301 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 KCNJ12Q14500 433 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 EZH2Q15910 746 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 CCDC122Q5T0U0 273 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 GTF2IRD2BQ6EKJ0 949 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 IQCEQ6IPM2 695 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF790Q6PG37 636 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 POMZP3Q6PJE2 187 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 GLB1LQ6UWU2 654 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 LMBR1LQ6UX01 489 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 LRIG3Q6UXM1 1119 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 EP400NLQ6ZTU2 488 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 RALYLQ86SE5 291 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 GTF2IRD2Q86UP8 949 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 NLRP14Q86W24 1093 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 IQCA1Q86XH1 822 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 RAB11FIP4Q86YS3 637 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 DCP2Q8IU60 420 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 EGFL6Q8IUX8 553 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 CCDC50Q8IVM0 306 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 CCDC13Q8IYE1 715 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 FUKQ8N0W3 1084 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ADSSL1Q8N142 457 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 CRACR2BQ8N4Y2 399 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 OTUD6BQ8N6M0 293 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 KCNH5Q8NCM2 988 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 SPATA4Q8NEY3 305 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 PLBD2Q8NHP8 589 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 FRS2Q8WU20 508 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 HDAC7Q8WUI4 952 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 SEC14L1Q92503 715 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 P3H4Q92791 437 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 PHKBQ93100 1093 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 FERMT2Q96AC1 680 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 IQCDQ96DY2 449 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 LTV1Q96GA3 475 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 TRMT2BQ96GJ1 504 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZIM3Q96PE6 472 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 CCT8L2Q96SF2 557 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 LRRC1Q9BTT6 524 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 SSBP3Q9BWW4 388 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 PRDM16Q9HAZ2 1276 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 KCNMB3Q9NPA1 279 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 TAB2Q9NYJ8 693 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 DDX20Q9UHI6 824 aaKnown RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 SLC12A6Q9UHW9 1150 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 TMEFF2Q9UIK5 374 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 KCNG1Q9UIX4 513 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 GUCA1BQ9UMX6 200 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 NFS1Q9Y697 457 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 BCORQ6W2J9 1755 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 CHD4Q14839 1912 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 RIC1Q4ADV7 1423 aa4.54□□□□□ -1.68
HMGB3P22-202ENST00000451823 UBR2Q8IWV8 1755 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 DLEC1Q9Y238 1755 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 ARAP2Q8WZ64 1704 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 TCRBV5S4A2TA0A5A2 114 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 KLHL33A6NCF5 533 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 GOLGA8AA7E2F4 631 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 HMGB1P1B2RPK0 211 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 DNM1LO00429 736 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 PPIP5K2O43314 1243 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 KIAA0754O94854 1291 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 DEXIO95424 95 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 CYP1A1P04798 512 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 APPP05067 770 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 PARP1P09874 1014 aaKnown RBP4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 TCP1P17987 556 aaKnown RBP4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 FPR2P25090 351 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 CYLC1P35663 651 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 BCL6P41182 706 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 DNM2P50570 870 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 ITGA1P56199 1179 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZBED6P86452 979 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 ICA1Q05084 483 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 CYP4F3Q08477 520 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 C2orf54Q08AI8 447 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 IFFO1Q0D2I5 559 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 AIMP1Q12904 312 aaKnown RBP4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 PAK1Q13153 545 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 RIPK1Q13546 671 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 TRIM29Q14134 588 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 KCNB1Q14721 858 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 UBE3CQ15386 1083 aa4.53□□□□□ -1.68
HMGB3P22-202ENST00000451823 NPY5RQ15761 445 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms