RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 OR4Q2P0C623 313 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 DDIT3P35638 169 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 UBXN2BQ14CS0 331 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 CYP4A22Q5TCH4 519 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 IQCEQ6IPM2 695 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 USP49Q70CQ1 688 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 PDZD4Q76G19 769 aaPredicted RBP29.48■■■□□ 2.31
USP42-204ENST00000451154 ELMOD1Q8N336 334 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 EPSTI1Q96J88 318 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 MAFFQ9ULX9 164 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 CLIC4Q9Y696 253 aa29.48■■■□□ 2.31
USP42-204ENST00000451154 GVINP1Q7Z2Y8 2422 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 FAM170BA6NMN3 283 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 PPEF2O14830 753 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 TBCAO75347 108 aaKnown RBP29.47■■■□□ 2.31
USP42-204ENST00000451154 ADRB2P07550 413 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 SCP2P22307 547 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 AARSP49588 968 aaKnown RBP eCLIP29.47■■■□□ 2.31
USP42-204ENST00000451154 ZC2HC1CQ53FD0 456 aaPredicted RBP29.47■■■□□ 2.31
USP42-204ENST00000451154 FAM78AQ5JUQ0 283 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 LARP4BQ92615 738 aaKnown RBP29.47■■■□□ 2.31
USP42-204ENST00000451154 ELSPBP1Q96BH3 223 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 ZSWIM3Q96MP5 696 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 PGLYRP2Q96PD5 576 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 CCSER1Q9C0I3 900 aa29.47■■■□□ 2.31
USP42-204ENST00000451154 ANKRD63C9JTQ0 380 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 XPOTO43592 962 aaKnown RBP29.46■■■□□ 2.31
USP42-204ENST00000451154 MICAL2O94851 1124 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 SP9P0CG40 484 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 GTF2BQ00403 316 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 CUL4AQ13619 759 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 SPATA1Q5VX52 437 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 JADE1Q6IE81 842 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 USP37Q86T82 979 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 KCNG4Q8TDN1 519 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 CPSF3Q9UKF6 684 aaKnown RBP29.46■■■□□ 2.31
USP42-204ENST00000451154 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.46■■■□□ 2.31
USP42-204ENST00000451154 ZNF292O60281 2723 aa29.46■■■□□ 2.31
USP42-204ENST00000451154 MOSPD3O75425 235 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 VNN2O95498 520 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 MYL4P12829 197 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 GJA1P17302 382 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 FCARP24071 287 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 BEST2Q8NFU1 509 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 TSPAN18Q96SJ8 248 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 ZFP14Q9HCL3 533 aa29.45■■■□□ 2.31
USP42-204ENST00000451154 TISP43B9A030 160 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 ACOT2P49753 483 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 LILRA4P59901 499 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 GRM2Q14416 872 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 PTPAQ15257 358 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 TPRG1Q6ZUI0 275 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 BCO2Q9BYV7 579 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 CRISPLD1Q9H336 500 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 LTB4R2Q9NPC1 389 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 HEBP1Q9NRV9 189 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 F5P12259 2224 aa29.44■■■□□ 2.3
USP42-204ENST00000451154 ANK1P16157 1881 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 OR6C75A6NL08 312 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 NFICP08651 508 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 DUSP4Q13115 394 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 OVOS1Q6IE37 1185 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 DYMQ7RTS9 669 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 MAP4K3Q8IVH8 894 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 CD302Q8IX05 232 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 MAML2Q8IZL2 1156 aaPredicted RBP29.43■■■□□ 2.3
USP42-204ENST00000451154 KRI1Q8N9T8 703 aaKnown RBP29.43■■■□□ 2.3
USP42-204ENST00000451154 SENP8Q96LD8 212 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 ASB16Q96NS5 453 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 OXCT2Q9BYC2 517 aaPredicted RBP29.43■■■□□ 2.3
USP42-204ENST00000451154 IKZF4Q9H2S9 585 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 ASAH2Q9NR71 780 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 SPATA6Q9NWH7 488 aaPredicted RBP29.43■■■□□ 2.3
USP42-204ENST00000451154 SLC27A5Q9Y2P5 690 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 YIPF1Q9Y548 306 aa29.43■■■□□ 2.3
USP42-204ENST00000451154 SPTLC1O15269 473 aa29.42■■■□□ 2.3
USP42-204ENST00000451154 GPR17Q13304 367 aa29.42■■■□□ 2.3
USP42-204ENST00000451154 C9orf57Q5W0N0 161 aa29.42■■■□□ 2.3
USP42-204ENST00000451154 ADALQ6DHV7 355 aa29.42■■■□□ 2.3
USP42-204ENST00000451154 FAM173BQ6P4H8 233 aa29.42■■■□□ 2.3
USP42-204ENST00000451154 OSBPL6Q9BZF3 934 aa29.42■■■□□ 2.3
USP42-204ENST00000451154 SEMA4AQ9H3S1 761 aa29.42■■■□□ 2.3
USP42-204ENST00000451154 LMNAP02545 664 aaKnown RBP29.41■■■□□ 2.3
USP42-204ENST00000451154 TYMPP19971 482 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 PDCP20941 246 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 SCN1AP35498 2009 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 VIPR2P41587 438 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 EPHA5P54756 1037 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 TMEM132DQ14C87 1099 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 SMARCD2Q92925 531 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 CLIC6Q96NY7 704 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 TMEM209Q96SK2 561 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 TRMT61BQ9BVS5 477 aaKnown RBP29.41■■■□□ 2.3
USP42-204ENST00000451154 BRD9Q9H8M2 597 aa29.41■■■□□ 2.3
USP42-204ENST00000451154 FBXO2Q9UK22 296 aaPredicted RBP29.41■■■□□ 2.3
USP42-204ENST00000451154 PIRO00625 290 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 ABCD1P33897 745 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 CEBPZQ03701 1054 aaKnown RBP29.4■■■□□ 2.3
USP42-204ENST00000451154 TEAD2Q15562 447 aa29.4■■■□□ 2.3
USP42-204ENST00000451154 CENPPQ6IPU0 288 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms