RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 NTHL1P78549 312 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 PPP2R3AQ06190 1150 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 ENOX2Q16206 610 aaKnown RBP18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 FAM26FQ5R3K3 315 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 VARS2Q5ST30 1063 aaKnown RBP18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 ANKS3Q6ZW76 656 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 GRASPQ7Z6J2 395 aaPredicted RBP18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 MAP4K3Q8IVH8 894 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 ST13P5Q8NFI4 369 aaPredicted RBP18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 MYADMQ96S97 322 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 MRPL44Q9H9J2 332 aaKnown RBP18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 RPF1Q9H9Y2 349 aaKnown RBP18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 PLEKHA5Q9HAU0 1116 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 OLFML3Q9NRN5 406 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 MAN1B1Q9UKM7 699 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 POLIQ9UNA4 740 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 BACE2Q9Y5Z0 518 aa18.48■□□□□ 0.55
PRPF40A-204ENST00000450303 DOCK8Q8NF50 2099 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 PLA2G5P39877 138 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 PPP1R2P41236 205 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 ACOT2P49753 483 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 ALCAMQ13740 583 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 ZNF658Q5TYW1 1059 aaPredicted RBP18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 GET4Q7L5D6 327 aaPredicted RBP18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 ZNF720Q7Z2F6 126 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 SLC7A14Q8TBB6 771 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 RSAD2Q8WXG1 361 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 RHOBTB2Q9BYZ6 727 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 KCNK12Q9HB15 430 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 DACH1Q9UI36 760 aa18.47■□□□□ 0.55
PRPF40A-204ENST00000450303 ZNF318Q5VUA4 2279 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 SYCE3A1L190 88 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 BIN1O00499 593 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 PAPLNO95428 1278 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 NLRP12P59046 1061 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 STIM1Q13586 685 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 MORC3Q14149 939 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 ZBTB6Q15916 424 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 KYAT1Q16773 422 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 SUGP1Q8IWZ8 645 aaKnown RBP18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 UBALD2Q8IYN6 164 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 FBXL6Q8N531 539 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 SUSD3Q96L08 255 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 ST6GALNAC4Q9H4F1 302 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 ANO10Q9NW15 660 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 CPSF3Q9UKF6 684 aaKnown RBP18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 UBQLN1Q9UMX0 589 aaKnown RBP18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 PCDHB13Q9Y5F0 798 aa18.46■□□□□ 0.55
PRPF40A-204ENST00000450303 ANK1P16157 1881 aa18.46■□□□□ 0.54
PRPF40A-204ENST00000450303 TULP1O00294 542 aaPredicted RBP18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 GCNT3O95395 438 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 HNRNPA1P09651 372 aaKnown RBP eCLIP18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 ROR1Q01973 937 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 EHHADHQ08426 723 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 KCNA1Q09470 495 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 IER5LQ5T953 404 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 ISM2Q6H9L7 571 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 JADE1Q6IE81 842 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 SLC39A2Q9NP94 309 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 FBXL5Q9UKA1 691 aa18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 TIMM13Q9Y5L4 95 aaPredicted RBP18.45■□□□□ 0.54
PRPF40A-204ENST00000450303 WDR27A2RRH5 827 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 H7C4K7 107 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 PPEF2O14830 753 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 SYN3O14994 580 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 FSHRP23945 695 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 LRPAP1P30533 357 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 CASP5P51878 434 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 VCPP55072 806 aaKnown RBP18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 TDGQ13569 410 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 MRPL58Q14197 206 aaKnown RBP18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 STX1AQ16623 288 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 CTXN3Q4LDR2 81 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 MLKLQ8NB16 471 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 HVCN1Q96D96 273 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 STRA6Q9BX79 667 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 FGFBP2Q9BYJ0 223 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 HCFC1R1Q9NWW0 138 aa18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 AGO2Q9UKV8 859 aaKnown RBP18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 ARIH1Q9Y4X5 557 aaPredicted RBP18.44■□□□□ 0.54
PRPF40A-204ENST00000450303 EIF3DO15371 548 aaKnown RBP eCLIP18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 NARSO43776 548 aaKnown RBP18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 TBC1D4O60343 1298 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 XYLBO75191 536 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 PPP1R37O75864 691 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 ADRB2P07550 413 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 NFICP08651 508 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 LAMP2P13473 410 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 CYP3A5P20815 502 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 STK4Q13043 487 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 UVSSAQ2YD98 709 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 SLFN12LQ6IEE8 588 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 SLC8B1Q6J4K2 584 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 DSTYKQ6XUX3 929 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 ZNF461Q8TAF7 563 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 POMGNT1Q8WZA1 660 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 ACCSQ96QU6 501 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 EPS15L1Q9UBC2 864 aa18.43■□□□□ 0.54
PRPF40A-204ENST00000450303 PCDHB8Q9UN66 801 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms