RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 KIF26AQ9ULI4 1882 aaPredicted RBP13.88□□□□□ -0.19
AC004540.1-204ENST00000449537 J3QKU1 62 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 EML1O00423 815 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 TBX3O15119 743 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 RECQL4O94761 1208 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 DRD1P21728 446 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 BCKDHBP21953 392 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 GALK1P51570 392 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 TRIP6Q15654 476 aaKnown RBP13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 UPP1Q16831 310 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 STXBP5Q5T5C0 1151 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 SYT12Q8IV01 421 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 RPLP0P6Q8NHW5 317 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 UROC1Q96N76 676 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 LRRC3Q9BY71 257 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 NFKBIZQ9BYH8 718 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 SLKQ9H2G2 1235 aaPredicted RBP13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 MBD1Q9UIS9 605 aaPredicted RBP13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 FBXL5Q9UKA1 691 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 PCDHB9Q9Y5E1 797 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 UNC79Q9P2D8 2635 aa13.87□□□□□ -0.19
AC004540.1-204ENST00000449537 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 ATXN7O15265 892 aaPredicted RBP13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 ZBTB43O43298 467 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 OPHN1O60890 802 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 YWHABP31946 246 aaKnown RBP13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 RUNX3Q13761 415 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 CAPSQ13938 189 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 MAPK6Q16659 721 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 CTXN3Q4LDR2 81 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 SLC23A3Q6PIS1 610 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 PNPLA1Q8N8W4 532 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 TSTD1Q8NFU3 115 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 EXOC4Q96A65 974 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 ACDQ96AP0 544 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 CRELD1Q96HD1 420 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 GTPBP2Q9BX10 602 aaKnown RBP13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 TPSD1Q9BZJ3 242 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 ATXN3LQ9H3M9 355 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 FBRSL1Q9HCM7 1045 aaKnown RBP13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 TMEM74BQ9NUR3 256 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 DKK4Q9UBT3 224 aa13.86□□□□□ -0.19
AC004540.1-204ENST00000449537 SYN3O14994 580 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 MAP3K13O43283 966 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 DPP6P42658 865 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 MRPL58Q14197 206 aaKnown RBP13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 ARHGAP15Q53QZ3 475 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 GPR158Q5T848 1215 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 LPCAT2Q7L5N7 544 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 LSM14AQ8ND56 463 aaKnown RBP13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 C3orf58Q8NDZ4 430 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 ASAP3Q8TDY4 903 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 WRAP73Q9P2S5 460 aaPredicted RBP13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 CELSR3Q9NYQ7 3312 aa13.85□□□□□ -0.19
AC004540.1-204ENST00000449537 TENM4Q6N022 2769 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 A0A087WV48 116 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 CYP3A7-CYP3A51PA0A087WV96 503 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 GOLGA8AA7E2F4 631 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 N4BP3O15049 544 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 ZBTB39O15060 712 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 CFIP05156 583 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 CD59P13987 128 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 CYP3A7P24462 503 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 CHMLP26374 656 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 WEE1P30291 646 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 ARL2P36404 184 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 MCM2P49736 904 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 EPHB3P54753 998 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 PSMD2Q13200 908 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 PLD1Q13393 1074 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 GLRA4Q5JXX5 417 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 TMC8Q8IU68 726 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 NOSTRINQ8IVI9 506 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 SCUBE3Q8IX30 993 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 ZNF843Q8N446 348 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 ETNPPLQ8TBG4 499 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 TBCKQ8TEA7 893 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 PPP1R10Q96QC0 940 aaKnown RBP13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 P2RY13Q9BPV8 354 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 FAM83CQ9BQN1 747 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 BRPF3Q9ULD4 1205 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 SLC6A14Q9UN76 642 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 GDAQ9Y2T3 454 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 MYO18BQ8IUG5 2567 aa13.84□□□□□ -0.19
AC004540.1-204ENST00000449537 ZNF462Q96JM2 2506 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 OTOL1A6NHN0 477 aaPredicted RBP13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 SGSM2O43147 1006 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 ARHGAP6O43182 974 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 TDP2O95551 362 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 FGF19O95750 216 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 GLRA2P23416 452 aa13.83□□□□□ -0.2
AC004540.1-204ENST00000449537 CDC27P30260 824 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms