RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 MYH6P13533 1939 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 SLC16A3O15427 465 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 C21orf2O43822 256 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CST8O60676 142 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 GGPS1O95749 300 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 NUDT17P0C025 328 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 BPIFB4P59827 614 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CEP55Q53EZ4 464 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 ZBTB46Q86UZ6 589 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 WDR75Q8IWA0 830 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CHURC1Q8WUH1 139 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 TLCD1Q96CP7 247 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 LRGUKQ96M69 825 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 TMEM120AQ9BXJ8 343 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 PIH1D1Q9NWS0 290 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 APOBEC2Q9Y235 224 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 ZNF335Q9H4Z2 1342 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 RBAK-RBAKDNI3L0D1 243 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 O00370 1275 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 ARP10275 920 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 ZNF268Q14587 947 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 DCAF12L1Q5VU92 463 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 RFWD3Q6PCD5 774 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 LRRC74BQ6ZQY2 392 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 ZNF720Q7Z2F6 126 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CEP120Q8N960 986 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 SREK1Q8WXA9 508 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CENPTQ96BT3 561 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 NUF2Q9BZD4 464 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 RIOX1Q9H6W3 641 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 DNPEPQ9ULA0 475 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 LZTS1Q9Y250 596 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 ADCY3O60266 1144 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 KRT37O76014 449 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 SEC24DO94855 1032 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 FOXN2P32314 431 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 SLC12A3P55017 1021 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 AP3B2Q13367 1082 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 HIC1Q14526 733 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 FASTKD3Q14CZ7 662 aaKnown RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CHI3L2Q15782 390 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 DSTYKQ6XUX3 929 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 PIGWQ7Z7B1 504 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CDR2LQ86X02 465 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 FHDC1Q9C0D6 1143 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 NMRK1Q9NWW6 199 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 PI4KBQ9UBF8 816 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 CORO1CQ9ULV4 474 aaPredicted RBP13.06□□□□□ -0.32
UBE3B-204ENST00000449510 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
UBE3B-204ENST00000449510 AIM2O14862 343 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 DDX3YO15523 660 aaKnown RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 SERPINB2P05120 415 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 SRGAP2CP0DJJ0 459 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 PYGBP11216 843 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 NR1H3Q13133 447 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 RASA2Q15283 850 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 KRT80Q6KB66 452 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 NME8Q8N427 588 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 RAB6BQ9NRW1 208 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 UVRAGQ9P2Y5 699 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 GTF3C4Q9UKN8 822 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 MYH13Q9UKX3 1938 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 ASTN1O14525 1302 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 A0A0A6YYK5 440 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 TRIM49D1C9J1S8 452 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 CASQ2O14958 399 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 TAC1P20366 129 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 PRAMEP78395 509 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 ZDHHC24Q6UX98 284 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 MAP7D3Q8IWC1 876 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 FBXO36Q8NEA4 188 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 USP6NLQ92738 828 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 ESYT2A0FGR8 921 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 TMEM191BP0C7N4 346 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 GSTT1P30711 240 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 SGSM1Q2NKQ1 1148 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 C7orf31Q8N865 590 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 DEPDC1BQ8WUY9 529 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 MOV10L1Q9BXT6 1211 aaKnown RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 PDE4DIPQ5VU43 2346 aa13.05□□□□□ -0.32
UBE3B-204ENST00000449510 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-204ENST00000449510 MAGEA13PA6NCF6 341 aa13.04□□□□□ -0.32
UBE3B-204ENST00000449510 TGFB1I1O43294 461 aa13.04□□□□□ -0.32
UBE3B-204ENST00000449510 WEE2P0C1S8 567 aa13.04□□□□□ -0.32
UBE3B-204ENST00000449510 VCAM1P19320 739 aa13.04□□□□□ -0.32
UBE3B-204ENST00000449510 ECHS1P30084 290 aa13.04□□□□□ -0.32
UBE3B-204ENST00000449510 PRKCIP41743 596 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms