RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 C8orf74Q6P047 294 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 MON1BQ7L1V2 547 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 TMEM130Q8N3G9 435 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 ZNF606Q8WXB4 792 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 ACAP3Q96P50 834 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 OSMRQ99650 979 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 ARHGAP39Q9C0H5 1083 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 CARD9Q9H257 536 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 L1RE1Q9UN81 338 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 GINS2Q9Y248 185 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 NOC2LQ9Y3T9 749 aaKnown RBP18.9■□□□□ 0.62
LMNA-208ENST00000448611 THSD7BQ9C0I4 1608 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 MIF4GDA9UHW6 222 aaKnown RBP18.9■□□□□ 0.62
LMNA-208ENST00000448611 KRT19P08727 400 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 WEE2P0C1S8 567 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 DARSP14868 501 aaKnown RBP18.9■□□□□ 0.62
LMNA-208ENST00000448611 HOXC8P31273 242 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 PURAQ00577 322 aaKnown RBP18.9■□□□□ 0.62
LMNA-208ENST00000448611 PCBP1Q15365 356 aaKnown RBP eCLIP18.9■□□□□ 0.628e-7■■□□□ 14
LMNA-208ENST00000448611 DCAF4L1Q3SXM0 396 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 UBE2Q2Q8WVN8 375 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 ALG3Q92685 438 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 FAXDC2Q96IV6 333 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 KATNAL1Q9BW62 490 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 BCO2Q9BYV7 579 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 POLIQ9UNA4 740 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 C2CD2Q9Y426 696 aa18.9■□□□□ 0.62
LMNA-208ENST00000448611 TMEM110-MUSTN1A8MSY1 372 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 TREHO43280 583 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 DUSP11O75319 330 aaKnown RBP18.89■□□□□ 0.61
LMNA-208ENST00000448611 ITGB3P05106 788 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 RRM1P23921 792 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 FCGRTP55899 365 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 MRPS25P82663 173 aaKnown RBP18.89■□□□□ 0.61
LMNA-208ENST00000448611 ZNF200P98182 395 aaPredicted RBP18.89■□□□□ 0.61
LMNA-208ENST00000448611 TMEM132DQ14C87 1099 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 SCARA5Q6ZMJ2 495 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 CCNI2Q6ZMN8 369 aaPredicted RBP18.89■□□□□ 0.61
LMNA-208ENST00000448611 PHF13Q86YI8 300 aaPredicted RBP18.89■□□□□ 0.61
LMNA-208ENST00000448611 PASD1Q8IV76 773 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 DNAJC5GQ8N7S2 189 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 DNAJB3Q8WWF6 145 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 CD101Q93033 1021 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 BTBD6Q96KE9 485 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 ZSWIM1Q9BR11 485 aa18.89■□□□□ 0.61
LMNA-208ENST00000448611 NXF1Q9UBU9 619 aaKnown RBP18.89■□□□□ 0.61
LMNA-208ENST00000448611 CYBAP13498 195 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 PSMC4P43686 418 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 SLC7A5Q01650 507 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 SLC27A1Q6PCB7 646 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 CATSPER4Q7RTX7 472 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 KRT35Q92764 455 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 BEGAINQ9BUH8 593 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 VRTNQ9H8Y1 702 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 STIM2Q9P246 746 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 MYADML2A6NDP7 307 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 MAP2K7O14733 419 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 NPTXRO95502 500 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 ATICP31939 592 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 SSTR3P32745 418 aaPredicted RBP18.88■□□□□ 0.61
LMNA-208ENST00000448611 YWHAEP62258 255 aaKnown RBP18.88■□□□□ 0.61
LMNA-208ENST00000448611 TNNC1P63316 161 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 PTP4A2Q12974 167 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 WDR72Q3MJ13 1102 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 ZNF394Q53GI3 561 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 PPP1R2P3Q6NXS1 205 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 NT5DC4Q86YG4 428 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 CD302Q8IX05 232 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 TRIB2Q92519 343 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 VCPIP1Q96JH7 1222 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 KRT12Q99456 494 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 WNT8AQ9H1J5 351 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 GABRQQ9UN88 632 aa18.88■□□□□ 0.61
LMNA-208ENST00000448611 C17orf102A2RUQ5 167 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 MYBL2P10244 700 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 EIF4BP23588 611 aaKnown RBP18.87■□□□□ 0.61
LMNA-208ENST00000448611 PEX5P50542 639 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 C2CD6Q53TS8 623 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 APBB1IPQ7Z5R6 666 aaPredicted RBP18.87■□□□□ 0.61
LMNA-208ENST00000448611 CPNE8Q86YQ8 564 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 UBL4BQ8N7F7 174 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 RNPC3Q96LT9 517 aaKnown RBP18.87■□□□□ 0.61
LMNA-208ENST00000448611 C11orf70Q9BRQ4 267 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 SDCBP2Q9H190 292 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 ADAM22Q9P0K1 906 aa18.87■□□□□ 0.61
LMNA-208ENST00000448611 BRD2P25440 801 aaKnown RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 MARCKSL1P49006 195 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 LACTBP83111 547 aaPredicted RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 LLGL2Q6P1M3 1020 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 NOTUMQ6P988 496 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 TMEM40Q8WWA1 233 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 TFAP2BQ92481 460 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 HINFPQ9BQA5 517 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 AP1M1Q9BXS5 423 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 EIF2AQ9BY44 585 aaKnown RBP18.86■□□□□ 0.61
LMNA-208ENST00000448611 PLEKHA5Q9HAU0 1116 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 ANAPC7Q9UJX3 599 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 ITGA11Q9UKX5 1188 aa18.86■□□□□ 0.61
LMNA-208ENST00000448611 CCDC188H7C350 402 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms