RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 PIK3CAP42336 1068 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 MXI1P50539 228 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 GUCY2FP51841 1108 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 ERVFC1P60507 584 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 SOX4Q06945 474 aaPredicted RBP12.48□□□□□ -0.41
LINC00408-201ENST00000447784 ADAM15Q13444 863 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
LINC00408-201ENST00000447784 NCAPHQ15003 741 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 IQCB1Q15051 598 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 NAB2Q15742 525 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 MAN2A1Q16706 1144 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 UPP1Q16831 310 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 CDKAL1Q5VV42 579 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 C9orf57Q5W0N0 161 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 IRF2BP1Q8IU81 584 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 RNF214Q8ND24 703 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.48□□□□□ -0.41
LINC00408-201ENST00000447784 PLEKHO2Q8TD55 490 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 MICAL1Q8TDZ2 1067 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 RABGGTAQ92696 567 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 SLC35C1Q96A29 364 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 CDCA3Q99618 268 aaPredicted RBP12.48□□□□□ -0.41
LINC00408-201ENST00000447784 TUBGCP2Q9BSJ2 902 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 IMPG2Q9BZV3 1241 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 CLDND1Q9NY35 253 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 STK39Q9UEW8 545 aa12.48□□□□□ -0.41
LINC00408-201ENST00000447784 PTPRJQ12913 1337 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 ARHGEF37A1IGU5 675 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 NT5C1B-RDH14C9J2C7 533 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 SERPINC1P01008 464 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 C4BPAP04003 597 aaKnown RBP12.47□□□□□ -0.41
LINC00408-201ENST00000447784 LTBRP36941 435 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 PBX3P40426 434 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 TAF6P49848 677 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 MYL7Q01449 175 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 PPP3CAQ08209 521 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 ELAVL2Q12926 359 aaKnown RBP12.47□□□□□ -0.41
LINC00408-201ENST00000447784 NCOA4Q13772 614 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 SGSM1Q2NKQ1 1148 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 ZACNQ401N2 412 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 SV2CQ496J9 727 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 FILIP1LQ4L180 1135 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 VWA3BQ502W6 1294 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 WDR44Q5JSH3 913 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 FKBP15Q5T1M5 1219 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 ADGRD2Q7Z7M1 963 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 LRRC52Q8N7C0 313 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 EFHBQ8N7U6 833 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 C1orf127Q8N9H9 656 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 ZNF516Q92618 1163 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 IGSF21Q96ID5 467 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 UHRF1Q96T88 793 aaPredicted RBP12.47□□□□□ -0.41
LINC00408-201ENST00000447784 TCF25Q9BQ70 676 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 TLE6Q9H808 572 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 TAB2Q9NYJ8 693 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
LINC00408-201ENST00000447784 REV3LO60673 3130 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 MYO9BQ13459 2157 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 SF3B1O75533 1304 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00408-201ENST00000447784 ANO9A1A5B4 782 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 PIRO00625 290 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 P4HA2O15460 535 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 B4GALT3O60512 393 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 CSPG5O95196 566 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 KIF4AO95239 1232 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 P4HA1P13674 534 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 ATICP31939 592 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 NRIP1P48552 1158 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 FMO5P49326 533 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 MCCD1P59942 119 aaPredicted RBP12.46□□□□□ -0.41
LINC00408-201ENST00000447784 KRT31Q15323 416 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 DUSP6Q16828 381 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 C1orf220Q5T0J3 134 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 TDRD10Q5VZ19 366 aaKnown RBP12.46□□□□□ -0.41
LINC00408-201ENST00000447784 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 TMC7Q7Z402 723 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 DDX53Q86TM3 631 aaKnown RBP12.46□□□□□ -0.41
LINC00408-201ENST00000447784 MRPL43Q8N983 215 aaKnown RBP12.46□□□□□ -0.41
LINC00408-201ENST00000447784 FBXL13Q8NEE6 735 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 HASPINQ8TF76 798 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 TAF4BQ92750 862 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 FAM84AQ96KN4 292 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 PAAF1Q9BRP4 392 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 VPS16Q9H269 839 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 NDST4Q9H3R1 872 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 IGFLR1Q9H665 355 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 ENTPD7Q9NQZ7 604 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 CACNG4Q9UBN1 327 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 LIMA1Q9UHB6 759 aaKnown RBP12.46□□□□□ -0.41
LINC00408-201ENST00000447784 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
LINC00408-201ENST00000447784 FNDC1Q4ZHG4 1894 aaPredicted RBP12.45□□□□□ -0.42
LINC00408-201ENST00000447784 GRXCR2A6NFK2 248 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 KPNA7A9QM74 516 aa12.45□□□□□ -0.42
LINC00408-201ENST00000447784 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms