RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 NCKAP1LP55160 1127 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 ADALQ6DHV7 355 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 CDR2LQ86X02 465 aaPredicted RBP13.6□□□□□ -0.23
SSR4-205ENST00000447375 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 C12orf50Q8NA57 414 aaPredicted RBP13.6□□□□□ -0.23
SSR4-205ENST00000447375 DDX12PQ92771 950 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 DNAJC19Q96DA6 116 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 ACO2Q99798 780 aaKnown RBP13.6□□□□□ -0.23
SSR4-205ENST00000447375 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 PLA2G2FQ9BZM2 168 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 KBTBD4Q9NVX7 518 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 HES2Q9Y543 173 aa13.6□□□□□ -0.23
SSR4-205ENST00000447375 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 F8W810 466 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 POLR2DO15514 142 aaKnown RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 TRAK2O60296 914 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 TBCAO75347 108 aaKnown RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 NR1I2O75469 434 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 NPTXRO95502 500 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 FNTBP49356 437 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 SATB1Q01826 763 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 CREMQ03060 361 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 SF3A2Q15428 464 aaKnown RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 STPG1Q5TH74 334 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 LIN9Q5TKA1 542 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 DYMQ7RTS9 669 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 HAUS6Q7Z4H7 955 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 FAM160A2Q8N612 972 aaPredicted RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 FIZ1Q96SL8 496 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 TRIM6Q9C030 488 aaPredicted RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 PTPRHQ9HD43 1115 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 FAM13BQ9NYF5 915 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 FBXW11Q9UKB1 542 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 GIT1Q9Y2X7 761 aa13.59□□□□□ -0.23
SSR4-205ENST00000447375 FASNP49327 2511 aaKnown RBP13.59□□□□□ -0.23
SSR4-205ENST00000447375 TMEM8BA6NDV4 472 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 ARL5CA6NH57 179 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 SRRM3A6NNA2 597 aaPredicted RBP13.58□□□□□ -0.24
SSR4-205ENST00000447375 XYLBO75191 536 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 PROZP22891 400 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 RING1Q06587 406 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 STRN3Q13033 797 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 FUT10Q6P4F1 479 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 CNNM4Q6P4Q7 775 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 CEP68Q76N32 757 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 NPAS3Q8IXF0 933 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 DNASE1L2Q92874 299 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 DHX58Q96C10 678 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 PYM1Q9BRP8 204 aaKnown RBP13.58□□□□□ -0.24
SSR4-205ENST00000447375 ADPGKQ9BRR6 497 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 TARS2Q9BW92 718 aaKnown RBP13.58□□□□□ -0.24
SSR4-205ENST00000447375 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 TNMDQ9H2S6 317 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
SSR4-205ENST00000447375 ST6GALNAC4Q9H4F1 302 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 SEL1LQ9UBV2 794 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
SSR4-205ENST00000447375 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 VWA8A3KMH1 1905 aa13.58□□□□□ -0.24
SSR4-205ENST00000447375 FRMD3A2A2Y4 597 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 ABLIM1O14639 778 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 AXIN1O15169 862 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 C8AP07357 584 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 ZNF806P0C7X5 589 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 GAP43P17677 238 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 AKAP5P24588 427 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 ABCD1P33897 745 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 GTF2BQ00403 316 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 AMPD3Q01432 767 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 DSC1Q08554 894 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 CCDC6Q16204 474 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 DCAF4L1Q3SXM0 396 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 PSAPL1Q6NUJ1 521 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 PRSS55Q6UWB4 352 aaPredicted RBP13.57□□□□□ -0.24
SSR4-205ENST00000447375 ZPBP2Q6X784 338 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 ZNF720Q7Z2F6 126 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 APBB1IPQ7Z5R6 666 aaPredicted RBP13.57□□□□□ -0.24
SSR4-205ENST00000447375 FAM3CQ92520 227 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 MCRS1Q96EZ8 462 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 GAD1Q99259 594 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 ARRDC1-AS1Q9H2J1 176 aa13.57□□□□□ -0.24
SSR4-205ENST00000447375 MAGEF1Q9HAY2 307 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms