RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 HLA-CQ95604 372 aa23.71■■□□□ 1.39
APOE-204ENST00000446996 BORCS6Q96GS4 357 aa23.71■■□□□ 1.39
APOE-204ENST00000446996 OXCT2Q9BYC2 517 aaPredicted RBP23.71■■□□□ 1.39
APOE-204ENST00000446996 SIX4Q9UIU6 781 aa23.71■■□□□ 1.39
APOE-204ENST00000446996 AGAP1Q9UPQ3 857 aa23.71■■□□□ 1.39
APOE-204ENST00000446996 R3HCC1Q9Y3T6 440 aaKnown RBP23.71■■□□□ 1.39
APOE-204ENST00000446996 BRWD1Q9NSI6 2320 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 TRIM49BA6NDI0 452 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 LRRIQ3A6PVS8 624 aaPredicted RBP23.7■■□□□ 1.38
APOE-204ENST00000446996 H7C4K7 107 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 C2CD2LO14523 706 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 PPEF2O14830 753 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 PER2O15055 1255 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 SRGAP2BP0DMP2 458 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 TKTP29401 623 aaKnown RBP23.7■■□□□ 1.38
APOE-204ENST00000446996 POLR2BP30876 1174 aaKnown RBP23.7■■□□□ 1.38
APOE-204ENST00000446996 NDUFV1P49821 464 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 VAMP7P51809 220 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 NLRP12P59046 1061 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 PSMD5Q16401 504 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 LMBRD2Q68DH5 695 aaPredicted RBP23.7■■□□□ 1.38
APOE-204ENST00000446996 ZNF516Q92618 1163 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 SENP8Q96LD8 212 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 POP1Q99575 1024 aaKnown RBP23.7■■□□□ 1.38
APOE-204ENST00000446996 IGFLR1Q9H665 355 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 MTRRQ9UBK8 725 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 DACH1Q9UI36 760 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 DSEQ9UL01 958 aa23.7■■□□□ 1.38
APOE-204ENST00000446996 MTCL1Q9Y4B5 1905 aaKnown RBP23.7■■□□□ 1.38
APOE-204ENST00000446996 KPNA7A9QM74 516 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 TEX28O15482 410 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 CYP11A1P05108 521 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 KLRC2P26717 231 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 BFSP1Q12934 665 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 MYO1EQ12965 1108 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 CCDC183Q5T5S1 534 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 KLHL10Q6JEL2 608 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 TMEM130Q8N3G9 435 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 SLC22A17Q8WUG5 538 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 HDAC7Q8WUI4 952 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 CASP10Q92851 521 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 B3GALT6Q96L58 329 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 DUSP9Q99956 384 aaKnown RBP23.69■■□□□ 1.38
APOE-204ENST00000446996 UBE2ZQ9H832 354 aaPredicted RBP23.69■■□□□ 1.38
APOE-204ENST00000446996 METTL14Q9HCE5 456 aaKnown RBP23.69■■□□□ 1.38
APOE-204ENST00000446996 DPP7Q9UHL4 492 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 RWDD2AQ9UIY3 292 aa23.69■■□□□ 1.38
APOE-204ENST00000446996 I3L4J1 428 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 TULP1O00294 542 aaPredicted RBP23.68■■□□□ 1.38
APOE-204ENST00000446996 SPTLC1O15269 473 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 TBC1D4O60343 1298 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 OAZ2O95190 189 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 STAU1O95793 577 aaKnown RBP23.68■■□□□ 1.38
APOE-204ENST00000446996 C4BPAP04003 597 aaKnown RBP23.68■■□□□ 1.38
APOE-204ENST00000446996 ODC1P11926 461 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 GTF2H1P32780 548 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 GTF2F1P35269 517 aaKnown RBP eCLIP23.68■■□□□ 1.384e-6■■■■□ 25.2
APOE-204ENST00000446996 VARS2Q5ST30 1063 aaKnown RBP23.68■■□□□ 1.38
APOE-204ENST00000446996 SPATA18Q8TC71 538 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 CLSTN3Q9BQT9 956 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 GDAP2Q9NXN4 497 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 CLDND1Q9NY35 253 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 CTNND2Q9UQB3 1225 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 HCFC2Q9Y5Z7 792 aa23.68■■□□□ 1.38
APOE-204ENST00000446996 FGFR1OPO95684 399 aaKnown RBP23.67■■□□□ 1.38
APOE-204ENST00000446996 KRT19P08727 400 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 ATICP31939 592 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 LTBRP36941 435 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 CLCN4P51793 760 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 ZACNQ401N2 412 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 PRSS55Q6UWB4 352 aaPredicted RBP23.67■■□□□ 1.38
APOE-204ENST00000446996 DPH6Q7L8W6 267 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 FRMD5Q7Z6J6 570 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 SYAP1Q96A49 352 aaPredicted RBP23.67■■□□□ 1.38
APOE-204ENST00000446996 THEGQ9P2T0 379 aa23.67■■□□□ 1.38
APOE-204ENST00000446996 SPTBN5Q9NRC6 3674 aaKnown RBP23.66■■□□□ 1.38
APOE-204ENST00000446996 STX10O60499 249 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 GNA14O95837 355 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 GLP2RO95838 553 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 FAM163BP0C2L3 166 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 HOXB8P17481 243 aaPredicted RBP23.66■■□□□ 1.38
APOE-204ENST00000446996 ERCC5P28715 1186 aaPredicted RBP23.66■■□□□ 1.38
APOE-204ENST00000446996 DLG4P78352 724 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 YWHAHQ04917 246 aaPredicted RBP23.66■■□□□ 1.38
APOE-204ENST00000446996 RAB33AQ14088 237 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 AAK1Q2M2I8 961 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 C1orf220Q5T0J3 134 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 SLC8B1Q6J4K2 584 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 ZNF280DQ6N043 979 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 C15orf39Q6ZRI6 1047 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 VRTNQ9H8Y1 702 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 DZANK1Q9NVP4 752 aa23.66■■□□□ 1.38
APOE-204ENST00000446996 CYB561D2O14569 222 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 CST3P01034 146 aaPredicted RBP23.65■■□□□ 1.38
APOE-204ENST00000446996 TRPC3Q13507 836 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 KLHL40Q2TBA0 621 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 LILRA6Q6PI73 481 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 ELMSAN1Q6PJG2 1045 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 METTL23Q86XA0 190 aa23.65■■□□□ 1.38
APOE-204ENST00000446996 TMEM86AQ8N2M4 240 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms