RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 LRRN4Q8WUT4 740 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 TRAF3IP3Q9Y228 551 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 A0A1W2PPM1 405 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 H0YGN5 161 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 GRAP2O75791 330 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 STK10O94804 968 aaKnown RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 UNC5CO95185 931 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 GGPS1O95749 300 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 ECE1P42892 770 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 CYTH1Q15438 398 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 IZUMO2Q6UXV1 221 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 RAVER2Q9HCJ3 691 aaKnown RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 ZMYND8Q9ULU4 1186 aaPredicted RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 R3HDM2Q9Y2K5 976 aaKnown RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 NFS1Q9Y697 457 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 SPDYE5A6NIY4 337 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
APLF-203ENST00000445692 DDX3YO15523 660 aaKnown RBP12.71□□□□□ -0.37
APLF-203ENST00000445692 TMEM191BP0C7N4 346 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 PECAM1P16284 738 aaPredicted RBP12.71□□□□□ -0.37
APLF-203ENST00000445692 TCN1P20061 433 aaPredicted RBP12.71□□□□□ -0.37
APLF-203ENST00000445692 SOX11P35716 441 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 BMPR2Q13873 1038 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 TFDP1Q14186 410 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 CDC42EP5Q6NZY7 148 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 BTNL9Q6UXG8 535 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 PRPF31Q8WWY3 499 aaKnown RBP12.71□□□□□ -0.37
APLF-203ENST00000445692 ZNF570Q96NI8 536 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 MANSC1Q9H8J5 431 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 PCMTD2Q9NV79 361 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 NKX1-2Q9UD57 310 aaPredicted RBP12.71□□□□□ -0.37
APLF-203ENST00000445692 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 ATRNO75882 1429 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 MYH2Q9UKX2 1941 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 GPR75-ASB3A0A0A6YYF3 556 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 IQANK1A0A1B0GTG1 560 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 CSDE1O75534 798 aaKnown RBP12.71□□□□□ -0.37
APLF-203ENST00000445692 SRGAP2CP0DJJ0 459 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 BPIFB4P59827 614 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 SEPT6Q14141 434 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 DCAF12L1Q5VU92 463 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 NSL1Q96IY1 281 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 CENPKQ9BS16 269 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.37
APLF-203ENST00000445692 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.38
APLF-203ENST00000445692 TGFB1I1O43294 461 aa12.71□□□□□ -0.38
APLF-203ENST00000445692 DGKIO75912 1065 aa12.71□□□□□ -0.38
APLF-203ENST00000445692 LMNAP02545 664 aaKnown RBP12.71□□□□□ -0.38
APLF-203ENST00000445692 EML3Q32P44 896 aa12.71□□□□□ -0.38
APLF-203ENST00000445692 PRPF39Q86UA1 669 aaKnown RBP12.71□□□□□ -0.38
APLF-203ENST00000445692 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.38
APLF-203ENST00000445692 FAM13CQ8NE31 585 aa12.71□□□□□ -0.38
APLF-203ENST00000445692 TCP10LQ8TDR4 215 aa12.71□□□□□ -0.38
APLF-203ENST00000445692 PPWD1Q96BP3 646 aaKnown RBP12.71□□□□□ -0.38
APLF-203ENST00000445692 VPS11Q9H270 941 aa12.71□□□□□ -0.38
APLF-203ENST00000445692 PSMC3IPQ9P2W1 217 aaPredicted RBP12.71□□□□□ -0.38
APLF-203ENST00000445692 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.71□□□□□ -0.38
APLF-203ENST00000445692 ZWINTO95229 277 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 CAV1Q03135 178 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 MTMR1Q13613 665 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 LACTB2Q53H82 288 aaPredicted RBP12.7□□□□□ -0.38
APLF-203ENST00000445692 MROH9Q5TGP6 573 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 FAM71DQ8N9W8 422 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 SLC9A2Q9UBY0 812 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 GGA2Q9UJY4 613 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 NEMP1O14524 444 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 CST8O60676 142 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 PRKCIP41743 596 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 PEX5P50542 639 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 PTK7Q13308 1070 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 OR6B2Q6IFH4 312 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 ZCCHC23Q6ZST2 131 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 PCGF5Q86SE9 256 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 TBC1D16Q8TBP0 767 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 ATXN2LQ8WWM7 1075 aaKnown RBP12.7□□□□□ -0.38
APLF-203ENST00000445692 TLCD1Q96CP7 247 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 SCYL1Q96KG9 808 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 PCDHB18PQ96TA0 734 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 UNC45AQ9H3U1 944 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
APLF-203ENST00000445692 UVRAGQ9P2Y5 699 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 DNPEPQ9ULA0 475 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 AFF2P51816 1311 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 APRTP07741 180 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 NUDT17P0C025 328 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 QARSP47897 775 aaKnown RBP12.7□□□□□ -0.38
APLF-203ENST00000445692 AP2B1P63010 937 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 ASPHQ12797 758 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 FASTKD3Q14CZ7 662 aaKnown RBP12.7□□□□□ -0.38
APLF-203ENST00000445692 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 PTF1AQ7RTS3 328 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 ACER1Q8TDN7 264 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 DCLRE1BQ9H816 532 aa12.7□□□□□ -0.38
APLF-203ENST00000445692 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms