RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 MEIS2O14770 477 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 HSPA4LO95757 839 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 TAF12Q16514 161 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CCNG2Q16589 344 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 KYAT1Q16773 422 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 SV2AQ7L0J3 742 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 VCX3AQ9NNX9 186 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 RIPK2O43353 540 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CBWD6Q4V339 395 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 FSCBQ5H9T9 825 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CBWD3Q5JTY5 395 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CBWD5Q5RIA9 395 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 PCNX4Q63HM2 1172 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 C3orf62Q6ZUJ4 267 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 PAXIP1Q6ZW49 1069 aaPredicted RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CATSPER4Q7RTX7 472 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 IRF2BP2Q7Z5L9 587 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CCDC97Q96F63 343 aaPredicted RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 RANBP17Q9H2T7 1088 aaKnown RBP17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CXorf56Q9H5V9 222 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 NPHS2Q9NP85 383 aa17.53■□□□□ 0.4
TCOF1-206ENST00000445265 CST8O60676 142 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 FSBPO95073 299 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 KCNV1Q6PIU1 500 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 ZNF280CQ8ND82 737 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 SEPT1Q8WYJ6 367 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 SLC13A1Q9BZW2 595 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 GGA2Q9UJY4 613 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 ASTN1O14525 1302 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 RPL21P46778 160 aaKnown RBP17.52■□□□□ 0.4
TCOF1-206ENST00000445265 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
TCOF1-206ENST00000445265 CYP24A1Q07973 514 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 KCNA1Q09470 495 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 CLEC16AQ2KHT3 1053 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 C1orf228Q6PIY5 440 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 PPIL6Q8IXY8 311 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 IQCKQ8N0W5 287 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 KIF2BQ8N4N8 673 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 CERKQ8TCT0 537 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 MAGEB18Q96M61 343 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 CD248Q9HCU0 757 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 XPO7Q9UIA9 1087 aaKnown RBP17.52■□□□□ 0.4
TCOF1-206ENST00000445265 PCDHA3Q9Y5H8 950 aa17.52■□□□□ 0.4
TCOF1-206ENST00000445265 APOL1O14791 398 aa17.52■□□□□ 0.39
TCOF1-206ENST00000445265 ITGB3BPQ13352 177 aaPredicted RBP17.52■□□□□ 0.39
TCOF1-206ENST00000445265 ARL13BQ3SXY8 428 aa17.52■□□□□ 0.39
TCOF1-206ENST00000445265 C1orf146Q5VVC0 180 aa17.52■□□□□ 0.39
TCOF1-206ENST00000445265 HGSNATQ68CP4 663 aa17.52■□□□□ 0.39
TCOF1-206ENST00000445265 EXD1Q8NHP7 514 aa17.52■□□□□ 0.39
TCOF1-206ENST00000445265 SCFD2Q8WU76 684 aa17.52■□□□□ 0.39
TCOF1-206ENST00000445265 FAM161BQ96MY7 647 aa17.52■□□□□ 0.39
TCOF1-206ENST00000445265 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
TCOF1-206ENST00000445265 ZNF200P98182 395 aaPredicted RBP17.51■□□□□ 0.39
TCOF1-206ENST00000445265 KIF22Q14807 665 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 BMT2Q1RMZ1 405 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 KIF3CO14782 793 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 GSTA2P09210 222 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 PYGMP11217 842 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 STILQ15468 1287 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 ANKRD20A8PQ5CZ79 823 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 SPOPLQ6IQ16 392 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 NIPA1Q7RTP0 329 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 ARHGEF19Q8IW93 802 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 FAM167BQ9BTA0 163 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 ADAM33Q9BZ11 813 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 RSAD1Q9HA92 442 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 AGO4Q9HCK5 861 aaKnown RBP17.51■□□□□ 0.39
TCOF1-206ENST00000445265 KPNA7A9QM74 516 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 RBP3P10745 1247 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 MCL1Q07820 350 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 DNAJC3Q13217 504 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 ALG13Q9NP73 1137 aaKnown RBP17.51■□□□□ 0.39
TCOF1-206ENST00000445265 KLHL8Q9P2G9 620 aaPredicted RBP17.51■□□□□ 0.39
TCOF1-206ENST00000445265 PDGFRAP16234 1089 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 GEMIN4P57678 1058 aaKnown RBP17.51■□□□□ 0.39
TCOF1-206ENST00000445265 TTLL4Q14679 1199 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 LVRNQ6Q4G3 990 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 BEST2Q8NFU1 509 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 TSC22D3Q99576 134 aa17.51■□□□□ 0.39
TCOF1-206ENST00000445265 NCANO14594 1321 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 NQO1P15559 274 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 ITKQ08881 620 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 EAPPQ56P03 285 aaPredicted RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 CAPRIN2Q6IMN6 1127 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 SUGP1Q8IWZ8 645 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 RNF169Q8NCN4 708 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 ATG4CQ96DT6 458 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 RAB6BQ9NRW1 208 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 KITP10721 976 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 ACTR2P61160 394 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 AP2B1P63010 937 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 LONP2Q86WA8 852 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 SPATA33Q96N06 139 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 FRMD8P1Q9BZ68 369 aaPredicted RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 DHX35Q9H5Z1 703 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms