RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 WEE2P0C1S8 567 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 PSMC3P17980 439 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 ATXN3P54252 364 aaPredicted RBP19.52■□□□□ 0.72
SHANK3-203ENST00000445220 STXBP2Q15833 593 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 SCUBE1Q8IWY4 988 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 ZNF786Q8N393 782 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 RAB21Q9UL25 225 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 NMT2O60551 498 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 FSBPO95073 299 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 TAGAPQ8N103 731 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 APEX2Q9UBZ4 518 aa19.52■□□□□ 0.72
SHANK3-203ENST00000445220 USP17L15C9J2P7 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L13C9JLJ4 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L11C9JVI0 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L18D6R9N7 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L22D6RA61 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L17D6RBQ6 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L19D6RCP7 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L20D6RJB6 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 CYP26A1O43174 497 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 UBE3AQ05086 875 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L24Q0WX57 530 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 USP17L6PQ6QN14 398 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 ARID3BQ8IVW6 561 aaPredicted RBP19.52■□□□□ 0.71
SHANK3-203ENST00000445220 STX19Q8N4C7 294 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 ERGIC2Q96RQ1 377 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 RXFP1Q9HBX9 757 aa19.52■□□□□ 0.71
SHANK3-203ENST00000445220 HERC5Q9UII4 1024 aaKnown RBP19.52■□□□□ 0.71
SHANK3-203ENST00000445220 TCN1P20061 433 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 AASDHQ4L235 1098 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 WASHC2DQ5SRD0 308 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 C1orf228Q6PIY5 440 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 IZUMO2Q6UXV1 221 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 C3orf62Q6ZUJ4 267 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 OR6B3Q8NGW1 331 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 KLF6Q99612 283 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 TDRD3Q9H7E2 651 aaKnown RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 GRID1Q9ULK0 1009 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 CDYLQ9Y232 598 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 C21orf2O43822 256 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 CAND2O75155 1236 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 RNF135Q8IUD6 432 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 NUP93Q8N1F7 819 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 SLC16A4O15374 487 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 FKBP6O75344 327 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 PTPN4P29074 926 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 ERVK-24P63145 666 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 SCARF1Q14162 830 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 C12orf60Q5U649 245 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 NSUN6Q8TEA1 469 aaKnown RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 XPO7Q9UIA9 1087 aaKnown RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 ZNF839A8K0R7 811 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 APOL1O14791 398 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 ALBP02768 609 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 P4HBP07237 508 aaKnown RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 CALB2P22676 271 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 COILP38432 576 aaPredicted RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 SERPINB8P50452 374 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 RPS6P62753 249 aaKnown RBP19.51■□□□□ 0.71
SHANK3-203ENST00000445220 CENPCQ03188 943 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 QRICH1Q2TAL8 776 aa19.51■□□□□ 0.71
SHANK3-203ENST00000445220 PDIA5Q14554 519 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 ATXN7L3BQ96GX2 97 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 CACNB3P54284 484 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 SNAP25P60880 206 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 TTC39BQ5VTQ0 682 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 RBBP8NLQ8NC74 664 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 CNDP1Q96KN2 507 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 KLHL4Q9C0H6 718 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 HACD3Q9P035 362 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 C1orf167Q5SNV9 1468 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 PRR23D1E9PI22 279 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 F5H6K3 240 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 ZSCAN9O15535 394 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 PRR23D2P0DMB1 279 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 FNTAP49354 379 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 KLRC3Q07444 240 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 SF3B3Q15393 1217 aaKnown RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 CHI3L2Q15782 390 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 SBK1Q52WX2 424 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 BTBD7Q9P203 1132 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 ALG6Q9Y672 507 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 F5H423 210 aaPredicted RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 GUCY1A2P33402 732 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 MLH1P40692 756 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 GEMIN4P57678 1058 aaKnown RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 TNFAIP2Q03169 654 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 MAPK7Q13164 816 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 LBRQ14739 615 aaKnown RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 RBM43Q6ZSC3 357 aaKnown RBP19.5■□□□□ 0.71
SHANK3-203ENST00000445220 KCNB2Q92953 911 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 FUCA2Q9BTY2 467 aa19.5■□□□□ 0.71
SHANK3-203ENST00000445220 RASSF9O75901 435 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 KCNMA1Q12791 1236 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 TJAP1Q5JTD0 557 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 EP400NLQ6ZTU2 488 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 THNSL1Q8IYQ7 743 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 MIEF2Q96C03 454 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 ARHGEF26Q96DR7 871 aa19.49■□□□□ 0.71
SHANK3-203ENST00000445220 DNAJC7Q99615 494 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms