RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 TRAK2O60296 914 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 FAM13AO94988 1023 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 VNN2O95498 520 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 CYP3A5P20815 502 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 VIPR2P41587 438 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 FZD5Q13467 585 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 KARSQ15046 597 aaKnown RBP16.79■□□□□ 0.28
SEC13-213ENST00000445064 ENOX2Q16206 610 aaKnown RBP16.79■□□□□ 0.28
SEC13-213ENST00000445064 ZNF852Q6ZMS4 543 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 USP37Q86T82 979 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 KIAA2013Q8IYS2 634 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 DCLK2Q8N568 766 aa16.79■□□□□ 0.28
SEC13-213ENST00000445064 TRMT61BQ9BVS5 477 aaKnown RBP16.79■□□□□ 0.28
SEC13-213ENST00000445064 PTPRZ1P23471 2315 aaPredicted RBP16.79■□□□□ 0.28
SEC13-213ENST00000445064 A0A0B4J269 797 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 PPEF2O14830 753 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 NCAM2O15394 837 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 SLC26A4O43511 780 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 FAM189A1O60320 539 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 PIGRP01833 764 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
SEC13-213ENST00000445064 ADRB2P07550 413 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 PLCG1P19174 1290 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 NMT1P30419 496 aaKnown RBP16.78■□□□□ 0.28
SEC13-213ENST00000445064 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
SEC13-213ENST00000445064 DUSP4Q13115 394 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 TEAD2Q15562 447 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 KYAT1Q16773 422 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 JADE1Q6IE81 842 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 VITQ6UXI7 678 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 BEST2Q8NFU1 509 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 KCNN1Q92952 543 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 CLDN23Q96B33 292 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 HINFPQ9BQA5 517 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 CRISPLD1Q9H336 500 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 PARVGQ9HBI0 331 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 ASAH2Q9NR71 780 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 FBXO4Q9UKT5 387 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 SLC27A5Q9Y2P5 690 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 YIPF1Q9Y548 306 aa16.78■□□□□ 0.28
SEC13-213ENST00000445064 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 GDI1P31150 447 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 MAGEA9P43362 315 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 ZNF131P52739 623 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 EPHA5P54756 1037 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 GPR17Q13304 367 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 ZNF528Q3MIS6 628 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 SPATA1Q5VX52 437 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 TSSK4Q6SA08 328 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 GPIHBP1Q8IV16 184 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 RASSF8Q8NHQ8 419 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 ZSCAN18Q8TBC5 510 aaPredicted RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 RAD54LQ92698 747 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 DNASE1L2Q92874 299 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 SMARCD2Q92925 531 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 MSTO1Q9BUK6 570 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 LRRC3Q9BY71 257 aa16.77■□□□□ 0.28
SEC13-213ENST00000445064 OXCT2Q9BYC2 517 aaPredicted RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 ZNF334Q9HCZ1 680 aaPredicted RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 CPSF3Q9UKF6 684 aaKnown RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 NDRG2Q9UN36 371 aaKnown RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 MRPS17Q9Y2R5 130 aaKnown RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.28
SEC13-213ENST00000445064 DMDP11532 3685 aa16.77■□□□□ 0.27
SEC13-213ENST00000445064 CACNA1IQ9P0X4 2223 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 OR6C75A6NL08 312 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 ANKRD63C9JTQ0 380 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 SPTLC1O15269 473 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
SEC13-213ENST00000445064 PSMC3P17980 439 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
SEC13-213ENST00000445064 RPS9P46781 194 aaKnown RBP16.76■□□□□ 0.27
SEC13-213ENST00000445064 MCM2P49736 904 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 ACOT2P49753 483 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 LILRA4P59901 499 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 GTF2BQ00403 316 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 FOXK2Q01167 660 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
SEC13-213ENST00000445064 OVOS1Q6IE37 1185 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 CENPPQ6IPU0 288 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 MAP4K3Q8IVH8 894 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 SUMF1Q8NBK3 374 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 LEMD2Q8NC56 503 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 SHKBP1Q8TBC3 707 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 RUBCNQ92622 972 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 IRF7Q92985 503 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 SENP8Q96LD8 212 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 TSPAN18Q96SJ8 248 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 TMEM209Q96SK2 561 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 FIZ1Q96SL8 496 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 DNAJC25Q9H1X3 360 aa16.76■□□□□ 0.27
SEC13-213ENST00000445064 PATJQ8NI35 1801 aa16.75■□□□□ 0.27
SEC13-213ENST00000445064 A0A1W2PRU2 124 aa16.75■□□□□ 0.27
SEC13-213ENST00000445064 TISP43B9A030 160 aa16.75■□□□□ 0.27
SEC13-213ENST00000445064 MAN2B1O00754 1011 aa16.75■□□□□ 0.27
SEC13-213ENST00000445064 DDIT3P35638 169 aa16.75■□□□□ 0.27
SEC13-213ENST00000445064 ALDH1A3P47895 512 aa16.75■□□□□ 0.27
SEC13-213ENST00000445064 CDR1P51861 262 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms