RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PDCD11Q14690 1871 aaKnown RBP15.18■□□□□ 0.02
SSBP3-208ENST00000444533 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 CHD9Q3L8U1 2897 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 LRRIQ3A6PVS8 624 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-208ENST00000444533 HUS1O60921 280 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 FGFR3P22607 806 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 ATICP31939 592 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 TNNC1P63316 161 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 YWHAHQ04917 246 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-208ENST00000444533 CAMK1Q14012 370 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 PTPN14Q15678 1187 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 PSMD5Q16401 504 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 ZNF280DQ6N043 979 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 RNF168Q8IYW5 571 aaPredicted RBP15.18■□□□□ 0.02
SSBP3-208ENST00000444533 THEM5Q8N1Q8 247 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 C3orf58Q8NDZ4 430 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 AUTS2Q8WXX7 1259 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 PIK3R5Q8WYR1 880 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 HPDLQ96IR7 371 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 SENP8Q96LD8 212 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 MMRN2Q9H8L6 949 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 TMEM63CQ9P1W3 806 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 FNIP2Q9P278 1114 aa15.18■□□□□ 0.02
SSBP3-208ENST00000444533 HIDE1A8MVS5 230 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 I3L4J1 428 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 CYB561D2O14569 222 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 N4BP1O75113 896 aaKnown RBP15.17■□□□□ 0.02
SSBP3-208ENST00000444533 TPM2P07951 284 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 TRIM21P19474 475 aaKnown RBP15.17■□□□□ 0.02
SSBP3-208ENST00000444533 TKTP29401 623 aaKnown RBP15.17■□□□□ 0.02
SSBP3-208ENST00000444533 PIK3CAP42336 1068 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 NDUFV1P49821 464 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 WNT7BP56706 349 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 CLDN10P78369 228 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 KIAA0319Q5VV43 1072 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 TAS1R1Q7RTX1 841 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 ZC3H3Q8IXZ2 948 aaKnown RBP15.17■□□□□ 0.02
SSBP3-208ENST00000444533 MMS19Q96T76 1030 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 DUSP9Q99956 384 aaKnown RBP15.17■□□□□ 0.02
SSBP3-208ENST00000444533 VN1R3Q9BXE9 311 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 DNAI2Q9GZS0 605 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 TMEM8AQ9HCN3 771 aa15.17■□□□□ 0.02
SSBP3-208ENST00000444533 M0QZQ0 153 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 PER2O15055 1255 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 TRIM49P0CI25 452 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 TRIM49CP0CI26 452 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 TYMPP19971 482 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 AARSP49588 968 aaKnown RBP eCLIP15.16■□□□□ 0.02
SSBP3-208ENST00000444533 MXI1P50539 228 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 NCOA4Q13772 614 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 DUSP6Q16828 381 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 SGSM1Q2NKQ1 1148 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 ZNF699Q32M78 642 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 CTXN3Q4LDR2 81 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 WDR44Q5JSH3 913 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 RTP2Q5QGT7 225 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 VARS2Q5ST30 1063 aaKnown RBP15.16■□□□□ 0.02
SSBP3-208ENST00000444533 KRT39Q6A163 491 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 OVOS1Q6IE37 1185 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 TMEM86AQ8N2M4 240 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 EFHBQ8N7U6 833 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 ANKRD20A12PQ8NF67 263 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 TAF4BQ92750 862 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 CASP10Q92851 521 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 HLA-CQ95604 372 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 B3GALT6Q96L58 329 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 CLDND1Q9NY35 253 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 COG5Q9UP83 839 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.16■□□□□ 0.02
SSBP3-208ENST00000444533 SNX9Q9Y5X1 595 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 BACE2Q9Y5Z0 518 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 ANK1P16157 1881 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 PTPRJQ12913 1337 aa15.16■□□□□ 0.02
SSBP3-208ENST00000444533 CHD7Q9P2D1 2997 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 SZT2Q5T011 3432 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 PPEF2O14830 753 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 EFEMP2O95967 443 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 GLUD1P00367 558 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 C4BPAP04003 597 aaKnown RBP15.15■□□□□ 0.02
SSBP3-208ENST00000444533 CNPP09543 421 aaKnown RBP15.15■□□□□ 0.02
SSBP3-208ENST00000444533 MTIF2P46199 727 aaKnown RBP15.15■□□□□ 0.02
SSBP3-208ENST00000444533 GCLMP48507 274 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 DLG4P78352 724 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 TYRO3Q06418 890 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 HYAL1Q12794 435 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 AAK1Q2M2I8 961 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 ZACNQ401N2 412 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 ZNF667Q5HYK9 610 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 TDRD10Q5VZ19 366 aaKnown RBP15.15■□□□□ 0.02
SSBP3-208ENST00000444533 PRSS55Q6UWB4 352 aaPredicted RBP15.15■□□□□ 0.02
SSBP3-208ENST00000444533 SV2AQ7L0J3 742 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 DPH6Q7L8W6 267 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 ADGRD2Q7Z7M1 963 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 TOP6BLQ8N6T0 577 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 SPATA18Q8TC71 538 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 PABPC5Q96DU9 382 aaKnown RBP15.15■□□□□ 0.02
SSBP3-208ENST00000444533 KLHL5Q96PQ7 755 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 RXFP1Q9HBX9 757 aa15.15■□□□□ 0.02
SSBP3-208ENST00000444533 GDAP2Q9NXN4 497 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms