RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MECOMQ03112 1051 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MOGSQ13724 837 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 PDCD4Q53EL6 469 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 SLC30A5Q8TAD4 765 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 EIF2AQ9BY44 585 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 OSBPL6Q9BZF3 934 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ADAMTS13Q76LX8 1427 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 hCG_1984214I3L0E3 225 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SMAPO00193 183 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TPD52L2O43399 206 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 NCF2P19878 526 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 SYDE2Q5VT97 1194 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 PCNX4Q63HM2 1172 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 KLHL35Q6PF15 583 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TRIML2Q8N7C3 387 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ZNF713Q8N859 430 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 CASP10Q92851 521 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 FAM118BQ9BPY3 351 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 WWP1Q9H0M0 922 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SELENONQ9NZV5 590 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ASAP1Q9ULH1 1129 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 BHMG1C9JSJ3 638 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 FAM163BP0C2L3 166 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 FAM58BPP0C7Q3 252 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ADGRA1Q86SQ6 560 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TRABD2AQ86V40 505 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 DNAJC10Q8IXB1 793 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 RTKN2Q8IZC4 609 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 GATA6Q92908 595 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SLC7A6OSQ96CW6 309 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 HBS1LQ9Y450 684 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 NKRFO15226 690 aaKnown RBP eCLIP5.28□□□□□ -1.56
HERC1-201ENST00000443617 BIRC5O15392 142 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ZNF24P17028 368 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ATF7P17544 494 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 EIF4BP23588 611 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 NT5C2P49902 561 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 NOP14P78316 857 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 MDH1BQ5I0G3 518 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TSPAN14Q8NG11 270 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 CMTM5Q96DZ9 223 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 RUSC1Q9BVN2 902 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 YIPF2Q9BWQ6 316 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SCINQ9Y6U3 715 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 FKBP6O75344 327 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 KRT37O76014 449 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 LDHBP07195 334 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 SRGAP2CP0DJJ0 459 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SRGAP2BP0DMP2 458 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ZNF12P17014 697 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 BGNP21810 368 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MFAP3P55082 362 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SLC1A5Q15758 541 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TTC27Q6P3X3 843 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ARL10Q8N8L6 244 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MIPEPQ99797 713 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 NMUR2Q9GZQ4 415 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 DISP2A7MBM2 1401 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 E9PMD0 336 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 AQP5P55064 265 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 POTEGQ6S5H5 508 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 C12orf50Q8NA57 414 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 C7orf43Q8WVR3 580 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 BTBD6Q96KE9 485 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 PPM1HQ9ULR3 514 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 PCDHA3Q9Y5H8 950 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TMEM94Q12767 1356 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 SGK1O00141 431 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 NOP56O00567 594 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 PRPF4O43172 522 aaKnown RBP eCLIP5.28□□□□□ -1.56
HERC1-201ENST00000443617 POLR2MP0CAP2 368 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ACAP1Q15027 740 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 CYP1B1Q16678 543 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 POTEAQ6S8J7 498 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 DDHD1Q8NEL9 900 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TEKT1Q969V4 418 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 DNAJC1Q96KC8 554 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 EPS15L1Q9UBC2 864 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 MARCOQ9UEW3 520 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 SEPT3Q9UH03 358 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 AP4S1Q9Y587 144 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 TM9SF1O15321 606 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 KITP10721 976 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ARHGAP4P98171 946 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 FAM172AQ8WUF8 416 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 NUDT12Q9BQG2 462 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 CPVLQ9H3G5 476 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 DNAJC18Q9H819 358 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 APEX2Q9UBZ4 518 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 ATP8B3O60423 1300 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 PPARGP37231 505 aaPredicted RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 STAT2P52630 851 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 NAA20P61599 178 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 FNDC8Q8TC99 324 aa5.28□□□□□ -1.56
HERC1-201ENST00000443617 RSL24D1Q9UHA3 163 aaKnown RBP5.28□□□□□ -1.56
HERC1-201ENST00000443617 SIGLEC16A6NMB1 481 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 TDP2O95551 362 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 ALAS1P13196 640 aa5.27□□□□□ -1.57
HERC1-201ENST00000443617 NSFP46459 744 aaKnown RBP5.27□□□□□ -1.57
HERC1-201ENST00000443617 RPL26P61254 145 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms