RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 FAM186BQ8IYM0 893 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 C1orf127Q8N9H9 656 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 PARD3BQ8TEW8 1205 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 CCDC127Q96BQ5 260 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 B3GALT6Q96L58 329 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 MKNK1Q9BUB5 465 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 MTMR12Q9C0I1 747 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 MTRRQ9UBK8 725 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 AGAP1Q9UPQ3 857 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 HCFC2Q9Y5Z7 792 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 PLXNA3P51805 1871 aa11.69□□□□□ -0.54
HDAC6-211ENST00000443563 MYO7AQ13402 2215 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 C5orf42Q9H799 3197 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 KPNA7A9QM74 516 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 I3L4J1 428 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 BIN1O00499 593 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 IKBKBO14920 756 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 LINC01565O15544 149 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 GLP2RO95838 553 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 EPB41P11171 864 aaKnown RBP11.68□□□□□ -0.54
HDAC6-211ENST00000443563 TYMPP19971 482 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 PTMSP20962 102 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 POLR2BP30876 1174 aaKnown RBP11.68□□□□□ -0.54
HDAC6-211ENST00000443563 LTBRP36941 435 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 WNT7BP56706 349 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 CLDN10P78369 228 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 YWHAHQ04917 246 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-211ENST00000443563 VARS2Q5ST30 1063 aaKnown RBP11.68□□□□□ -0.54
HDAC6-211ENST00000443563 ZNF280DQ6N043 979 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 ANKRD54Q6NXT1 300 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 PRSS55Q6UWB4 352 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-211ENST00000443563 TRAPPC11Q7Z392 1133 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 SLC22A17Q8WUG5 538 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 SENP8Q96LD8 212 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 ASB2Q96Q27 587 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 PLEKHA4Q9H4M7 779 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 PRDM6Q9NQX0 595 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 CD207Q9UJ71 328 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 SCN1AP35498 2009 aa11.68□□□□□ -0.54
HDAC6-211ENST00000443563 CYB561D2O14569 222 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 PPEF2O14830 753 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
HDAC6-211ENST00000443563 STX10O60499 249 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 PHACTR2O75167 634 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 TBX10O75333 385 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 AKAP3O75969 853 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 FGFR1OPO95684 399 aaKnown RBP11.67□□□□□ -0.54
HDAC6-211ENST00000443563 CYP11A1P05108 521 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 IGFBP6P24592 240 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-211ENST00000443563 CASP4P49662 377 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 VAMP7P51809 220 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 ITIH3Q06033 890 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 TRPC3Q13507 836 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 RAB33AQ14088 237 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 MRPL58Q14197 206 aaKnown RBP11.67□□□□□ -0.54
HDAC6-211ENST00000443563 CTXN3Q4LDR2 81 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 TJAP1Q5JTD0 557 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 LMBRD2Q68DH5 695 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-211ENST00000443563 ANKRD40Q6AI12 368 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 RTL10Q7L3V2 364 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 THEM5Q8N1Q8 247 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 MLKLQ8NB16 471 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 OR5B17Q8NGF7 314 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 MSLNLQ96KJ4 702 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 CLSTN3Q9BQT9 956 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 CLEC1BQ9P126 229 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 MAFFQ9ULX9 164 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 BARX2Q9UMQ3 279 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-211ENST00000443563 TSC2P49815 1807 aa11.67□□□□□ -0.54
HDAC6-211ENST00000443563 PTPRJQ12913 1337 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 OR6C75A6NL08 312 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 LRRIQ3A6PVS8 624 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 H3BQ06 376 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 TGM5O43548 720 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 HUS1O60921 280 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 OAZ2O95190 189 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 EPCAMP16422 314 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 RPL17P18621 184 aaKnown RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 BMP6P22004 513 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 ATICP31939 592 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 OR1D2P34982 312 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 TFF2Q03403 129 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 DLX2Q07687 328 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 BFSP1Q12934 665 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 PAK1Q13153 545 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 SMAD4Q13485 552 aaKnown RBP11.66□□□□□ -0.54
HDAC6-211ENST00000443563 BIRC3Q13489 604 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 TPGS2Q68CL5 300 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 OVOS1Q6IE37 1185 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 SLC8B1Q6J4K2 584 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 KLHL10Q6JEL2 608 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 CES5AQ6NT32 575 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 LILRA6Q6PI73 481 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 CYP26C1Q6V0L0 522 aa11.66□□□□□ -0.54
HDAC6-211ENST00000443563 DPH6Q7L8W6 267 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms