RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 WDR49Q8IV35 697 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 GOLGA5Q8TBA6 731 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 CCDC127Q96BQ5 260 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 SENP8Q96LD8 212 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 TMEM209Q96SK2 561 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 XYLT2Q9H1B5 865 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 KIAA1586Q9HCI6 787 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 PCDHB8Q9UN66 801 aa13.88□□□□□ -0.19
PDLIM2-212ENST00000443561 SYN3O14994 580 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 TGM5O43548 720 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 HCRTO43612 131 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 CALUO43852 315 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 PAPLNO95428 1278 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 C4BPAP04003 597 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 DLATP10515 647 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 BMP1P13497 986 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 CA8P35219 290 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 PPP3CAQ08209 521 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 ELAVL2Q12926 359 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 CCDC142Q17RM4 750 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 CEP135Q66GS9 1140 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 ANKRD54Q6NXT1 300 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 OSTM1Q86WC4 334 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 C12orf76Q8N812 135 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 SMRP1Q8NCR6 262 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 STK39Q9UEW8 545 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 FBXL5Q9UKA1 691 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 COG5Q9UP83 839 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 AGAP1Q9UPQ3 857 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 CTNND2Q9UQB3 1225 aa13.87□□□□□ -0.19
PDLIM2-212ENST00000443561 WDR27A2RRH5 827 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 MAPK13O15264 365 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 MBTPS2O43462 519 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 XPOTO43592 962 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 CYP11A1P05108 521 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 TMEM191BP0C7N4 346 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 SPATA31D3P0C874 917 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 IL9P15248 144 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 DPCR1Q3MIW9 517 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 KLHL10Q6JEL2 608 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 SPATA31D4Q6ZUB0 917 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 OR10T2Q8NGX3 314 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 TMC2Q8TDI7 906 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 NELFBQ8WX92 580 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 CCDC34Q96HJ3 373 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 ASB2Q96Q27 587 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 NUP62CLQ9H1M0 184 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 FBXW11Q9UKB1 542 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 ITGA11Q9UKX5 1188 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 L1RE1Q9UN81 338 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 NUB1Q9Y5A7 615 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 BACE2Q9Y5Z0 518 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 GREB1Q4ZG55 1949 aa13.86□□□□□ -0.19
PDLIM2-212ENST00000443561 OBSL1O75147 1896 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 OAZ2O95190 189 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 OR4Q2P0C623 313 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 TYMPP19971 482 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 KLRC2P26717 231 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 OR1D2P34982 312 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 NDUFV1P49821 464 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 TAF6P49848 677 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 STX17P56962 302 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 MYL6P60660 151 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 ROR1Q01973 937 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 ADAM9Q13443 819 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 RAB33AQ14088 237 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 SURF1Q15526 300 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 ZACNQ401N2 412 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 WSCD1Q658N2 575 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 SLC8B1Q6J4K2 584 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 KIAA1841Q6NSI8 718 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 FAM186BQ8IYM0 893 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 CSGALNACT2Q8N6G5 542 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 LRRC52Q8N7C0 313 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 TRIML1Q8N9V2 468 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 KBTBD7Q8WVZ9 684 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 ATXN2LQ8WWM7 1075 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 SUSD6Q92537 303 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 DHTKD1Q96HY7 919 aaPredicted RBP13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 ANKRD36BP1Q96IX9 119 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 APOL5Q9BWW9 433 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 CRISPLD1Q9H336 500 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 MAN1C1Q9NR34 630 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 HOOK1Q9UJC3 728 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 CDY1Q9Y6F8 540 aa13.85□□□□□ -0.19
PDLIM2-212ENST00000443561 KPNA7A9QM74 516 aa13.84□□□□□ -0.19
PDLIM2-212ENST00000443561 NRG2O14511 850 aaPredicted RBP13.84□□□□□ -0.19
PDLIM2-212ENST00000443561 RFPL2O75678 378 aa13.84□□□□□ -0.19
PDLIM2-212ENST00000443561 KIF20AO95235 890 aa13.84□□□□□ -0.19
PDLIM2-212ENST00000443561 SEC24AO95486 1093 aa13.84□□□□□ -0.19
PDLIM2-212ENST00000443561 ADH1AP07327 375 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms