RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 RNF10Q8N5U6 811 aaKnown RBP9.75□□□□□ -0.85
NR1I3-211ENST00000442691 CEP120Q8N960 986 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 BEST2Q8NFU1 509 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 OR5B17Q8NGF7 314 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 CXorf38Q8TB03 319 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 SH3TC2Q8TF17 1288 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 TSC1Q92574 1164 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF333Q96JL9 665 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF668Q96K58 619 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-211ENST00000442691 KREMEN1Q96MU8 473 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 TOX2Q96NM4 488 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 FTHL17Q9BXU8 183 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 BCO2Q9BYV7 579 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 IFIH1Q9BYX4 1025 aaKnown RBP9.75□□□□□ -0.85
NR1I3-211ENST00000442691 XYLT2Q9H1B5 865 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 SLC38A7Q9NVC3 462 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 UBQLN1Q9UMX0 589 aaKnown RBP9.75□□□□□ -0.85
NR1I3-211ENST00000442691 ST3GAL5Q9UNP4 418 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 GINS2Q9Y248 185 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 GIT1Q9Y2X7 761 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 R3HCC1Q9Y3T6 440 aaKnown RBP9.75□□□□□ -0.85
NR1I3-211ENST00000442691 NOC2LQ9Y3T9 749 aaKnown RBP9.75□□□□□ -0.85
NR1I3-211ENST00000442691 PCDHB2Q9Y5E7 798 aa9.75□□□□□ -0.85
NR1I3-211ENST00000442691 A0A0A6YYK5 440 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 FOXN3O00409 490 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 KIF5CO60282 957 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 CKBP12277 381 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 GZMAP12544 262 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 ATF7P17544 494 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 THPOP40225 353 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 PDE6CP51160 858 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 KIF5AQ12840 1032 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 MYO1EQ12965 1108 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 TUBB2AQ13885 445 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 DSC3Q14574 896 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 NAB2Q15742 525 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF699Q32M78 642 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 TWF2Q6IBS0 349 aaKnown RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 TRIM72Q6ZMU5 477 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF571Q7Z3V5 609 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 FAM126BQ8IXS8 530 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 UBR7Q8N806 425 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 C1orf127Q8N9H9 656 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 SLC30A5Q8TAD4 765 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 PGBD4Q96DM1 585 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 TUBB2BQ9BVA1 445 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 EIF2AQ9BY44 585 aaKnown RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 DNAI2Q9GZS0 605 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 RNF208Q9H0X6 261 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 AJAP1Q9UKB5 411 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-211ENST00000442691 SLC27A5Q9Y2P5 690 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 IPPQ9Y573 584 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 PAXBP1Q9Y5B6 917 aa9.74□□□□□ -0.85
NR1I3-211ENST00000442691 A0A0U1RQF3 1178 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 ANO9A1A5B4 782 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 MEFVO15553 781 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 RECQL4O94761 1208 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 SGPL1O95470 568 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 EOMESO95936 686 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 NFICP08651 508 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 PAEPP09466 180 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 HSPA8P11142 646 aaKnown RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 SELPP16109 830 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 FGFR4P22455 802 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 LRPAP1P30533 357 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF132P52740 706 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 APBA1Q02410 837 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 LPIN1Q14693 890 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 SEZ6Q53EL9 994 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF667Q5HYK9 610 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 GJB7Q6PEY0 223 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 TRAF7Q6Q0C0 670 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 KIAA1328Q86T90 577 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 TMEM192Q8IY95 271 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 SPATA18Q8TC71 538 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 APBB2Q92870 758 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 WNT8BQ93098 351 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 DEFB118Q96PH6 123 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 DESI2Q9BSY9 194 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 NXF3Q9H4D5 531 aaKnown RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 PRM3Q9NNZ6 103 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 TRMT13Q9NUP7 481 aaKnown RBP9.73□□□□□ -0.85
NR1I3-211ENST00000442691 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
NR1I3-211ENST00000442691 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms