RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 IER2Q9BTL4 223 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ASCC2Q9H1I8 757 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 PSTPIP2Q9H939 334 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 VTA1Q9NP79 307 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 OLFML3Q9NRN5 406 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.93□□□□□ -1.94
LIG4-203ENST00000442234 NKX1-2Q9UD57 310 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 MTRF1LQ9UGC7 380 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 HYOU1Q9Y4L1 999 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 KIF1BO60333 1816 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 THSD7AQ9UPZ6 1657 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 USP31Q70CQ4 1352 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 HEG1Q9ULI3 1381 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CCDC169A6NNP5 214 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 FZD9O00144 591 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NOL3O60936 208 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 MFAP3LO75121 409 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ENTPD5O75356 428 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PGM3O95394 542 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PARNO95453 639 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 CRYZL1O95825 349 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CHRNB1P11230 501 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ALADP13716 330 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ATP6V1B1P15313 513 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 JUNDP17535 347 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 MARCKSP29966 332 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 ERFP50548 548 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 GJA9P57773 515 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ZBTB16Q05516 673 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RNASELQ05823 741 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 NFIAQ12857 509 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NFE2L2Q16236 605 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CCL14Q16627 93 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 BOLA3Q53S33 107 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ZNF362Q5T0B9 420 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 RBM44Q6ZP01 1051 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 BTN2A1Q7KYR7 527 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TAS2R42Q7RTR8 314 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 C11orf96Q7Z7L8 435 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NDUFAF2Q8N183 169 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RUBCNQ92622 972 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 HDAC2Q92769 488 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 CAVIN3Q969G5 261 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 DGCR14Q96DF8 476 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 PRMT1Q99873 361 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 ERP44Q9BS26 406 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CCDC28BQ9BUN5 200 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RNF38Q9H0F5 515 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CCDC8Q9H0W5 538 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 EHD1Q9H4M9 534 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TMBIM4Q9HC24 238 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 MRPL40Q9NQ50 206 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 UCKL1Q9NWZ5 548 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 GIN1Q9NXP7 522 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TRIM10Q9UDY6 481 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RCOR1Q9UKL0 485 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 MAFFQ9ULX9 164 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PCDHA7Q9UN72 937 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ARL2BPQ9Y2Y0 163 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 EYSQ5T1H1 3165 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PLCH1Q4KWH8 1693 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 BCL9O00512 1426 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TRIOO75962 3097 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PPLO60437 1756 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 AOX1Q06278 1338 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SPTBN1Q01082 2364 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 C5orf60A6NFR6 353 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TRIM64A6NGJ6 449 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TRIM64BA6NI03 449 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 H7C0C1 242 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 AGRPO00253 132 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PFDN6O15212 129 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ASAP2O43150 1006 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 LILRB3O75022 631 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SERPINB7O75635 380 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NDUFA10O95299 355 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ZBTB11O95625 1053 aaPredicted RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 SHBGP04278 402 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 GNAI2P04899 355 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PGK2P07205 417 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SPATA31D3P0C874 917 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RARAP10276 462 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CES1P23141 567 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TCEA1P23193 301 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 STX2P32856 288 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 TMPOP42166 694 aaKnown RBP2.93□□□□□ -1.94
LIG4-203ENST00000442234 CRKP46108 304 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 GSSP48637 474 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CCNG1P51959 295 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 RAP1GDS1P52306 607 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 DSTNP60981 165 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 CDR2Q01850 454 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 DSG1Q02413 1049 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 COX10Q12887 443 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 PNOCQ13519 176 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 ITGA9Q13797 1035 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 SPIDRQ14159 915 aa2.93□□□□□ -1.94
LIG4-203ENST00000442234 NCAPHQ15003 741 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms