RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 VEPH1Q14D04 833 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 DCAF4L1Q3SXM0 396 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 ATAT1Q5SQI0 421 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 ETNPPLQ8TBG4 499 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 EEF2KMTQ96G04 330 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 MED10Q9BTT4 135 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 TIPINQ9BVW5 301 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 NFS1Q9Y697 457 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 NCOR1O75376 2440 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 PER2O15055 1255 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 ZBTB24O43167 697 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 EPHB4P54760 987 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 CORO7P57737 925 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 GRIN2CQ14957 1233 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 DCAF17Q5H9S7 520 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM109BQ6ICB4 259 aaPredicted RBP7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 KCNT2Q6UVM3 1135 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM228AQ86W67 206 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 SFR1Q86XK3 245 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 LRRC57Q8N9N7 239 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 SEC14L1Q92503 715 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 HLA-CQ95604 372 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 LENG9Q96B70 501 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 C17orf80Q9BSJ5 609 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 EHD2Q9NZN4 543 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 AIPL1Q9NZN9 384 aa7.91□□□□□ -1.14
CDC42BPA-208ENST00000442054 HUS1O60921 280 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 LDHAP00338 332 aaKnown RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 CD4P01730 458 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 CHRNA1P02708 482 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 P4HA1P13674 534 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 EIF4A3P38919 411 aaKnown RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 NRIP1P48552 1158 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 CDR1P51861 262 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 BFSP1Q12934 665 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 MYO1EQ12965 1108 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 MAN2A1Q16706 1144 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 SEZ6Q53EL9 994 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 WDR44Q5JSH3 913 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 IRF2BP2Q7Z5L9 587 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 SCN4BQ8IWT1 228 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 CD302Q8IX05 232 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 YAF2Q8IY57 180 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 FAM213AQ9BRX8 229 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 SIX2Q9NPC8 291 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 STXBP5LQ9Y2K9 1186 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 ATXN2Q99700 1313 aaKnown RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 IGSF9BQ9UPX0 1349 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 NPHP3-ACAD11A0A0J9YXS1 232 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 HAS3O00219 553 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 CETN3O15182 167 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 CLIC2O15247 247 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 CALUO43852 315 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 ERLIN1O75477 346 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 ADH1AP07327 375 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 PLS3P13797 630 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 BMPR1AP36894 532 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 SLC12A3P55017 1021 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 TNNC1P63316 161 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 TSPY1Q01534 308 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 PSMD2Q13200 908 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 DRP2Q13474 957 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 LRIT3Q3SXY7 679 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 MEI1Q5TIA1 1274 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 ACSF2Q96CM8 615 aaPredicted RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 PCYT2Q99447 389 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 SNX25Q9H3E2 840 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 SMARCAL1Q9NZC9 954 aa7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 NXF1Q9UBU9 619 aaKnown RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 AGO2Q9UKV8 859 aaKnown RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 RRP15Q9Y3B9 282 aaKnown RBP7.9□□□□□ -1.14
CDC42BPA-208ENST00000442054 ZNF233A6NK53 670 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 CES2O00748 559 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 DHX15O43143 795 aaKnown RBP7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 KRT86O43790 486 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZMYND10O75800 440 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 MOCS3O95396 460 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 EOMESO95936 686 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 ITGB8P26012 769 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 NMT1P30419 496 aaKnown RBP7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 BMP8BP34820 402 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 NPTX2P47972 431 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 GATMP50440 423 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 JAM2P57087 298 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 PTENP60484 403 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 NNTQ13423 1086 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 CCSAPQ6IQ19 270 aaPredicted RBP7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 RINT1Q6NUQ1 792 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 ECHDC2Q86YB7 292 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 KLHL23Q8NBE8 558 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 EHBP1Q8NDI1 1231 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 TRIM58Q8NG06 486 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 TSGA10Q9BZW7 698 aa7.9□□□□□ -1.15
CDC42BPA-208ENST00000442054 ACKR2O00590 384 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SLC26A4O43511 780 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 RB1P06400 928 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 GLI1P08151 1106 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 GLRA2P23416 452 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 ACOT2P49753 483 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms