RNA–Protein interactions for RNA: ENST00000441549.7

PDPK1-204, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-204ENST00000441549 ITGA11Q9UKX5 1188 aa25.67■■□□□ 1.7
PDPK1-204ENST00000441549 DDX3YO15523 660 aaKnown RBP25.66■■□□□ 1.7
PDPK1-204ENST00000441549 ATP8B1O43520 1251 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 ZRANB2O95218 330 aaKnown RBP eCLIP25.66■■□□□ 1.7
PDPK1-204ENST00000441549 NPTXRO95502 500 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 ITGB3P05106 788 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 NOMO3P69849 1222 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 GLE1Q53GS7 698 aaKnown RBP25.66■■□□□ 1.7
PDPK1-204ENST00000441549 NAA35Q5VZE5 725 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 USP38Q8NB14 1042 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 PPP1R13LQ8WUF5 828 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 FAM170AA1A519 330 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 CEP104O60308 925 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 STAU1O95793 577 aaKnown RBP25.66■■□□□ 1.7
PDPK1-204ENST00000441549 CRYBB1P53674 252 aaPredicted RBP25.66■■□□□ 1.7
PDPK1-204ENST00000441549 ZNF200P98182 395 aaPredicted RBP25.66■■□□□ 1.7
PDPK1-204ENST00000441549 SNX17Q15036 470 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 GNASQ5JWF2 1037 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 TAF2Q6P1X5 1199 aa25.66■■□□□ 1.7
PDPK1-204ENST00000441549 MYADML2A6NDP7 307 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 SEPT4O43236 478 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 ATMINO43313 823 aaPredicted RBP25.65■■□□□ 1.7
PDPK1-204ENST00000441549 P4HA1P13674 534 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 CD58P19256 250 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 VSNL1P62760 191 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 MON1BQ7L1V2 547 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 PHF13Q86YI8 300 aaPredicted RBP25.65■■□□□ 1.7
PDPK1-204ENST00000441549 CPA5Q8WXQ8 436 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.65■■□□□ 1.75e-7■■■□□ 16
PDPK1-204ENST00000441549 CARD9Q9H257 536 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 FAM124BQ9H5Z6 455 aaPredicted RBP25.65■■□□□ 1.7
PDPK1-204ENST00000441549 CYP3A43Q9HB55 503 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 RBM12Q9NTZ6 932 aaKnown RBP25.65■■□□□ 1.7
PDPK1-204ENST00000441549 NXF1Q9UBU9 619 aaKnown RBP25.65■■□□□ 1.7
PDPK1-204ENST00000441549 TMEM59LQ9UK28 342 aa25.65■■□□□ 1.7
PDPK1-204ENST00000441549 TTC7AQ9ULT0 858 aaPredicted RBP25.65■■□□□ 1.7
PDPK1-204ENST00000441549 PGRMC1O00264 195 aaKnown RBP25.64■■□□□ 1.7
PDPK1-204ENST00000441549 LSM8O95777 96 aaKnown RBP25.64■■□□□ 1.7
PDPK1-204ENST00000441549 WEE2P0C1S8 567 aa25.64■■□□□ 1.7
PDPK1-204ENST00000441549 RBP5P82980 135 aa25.64■■□□□ 1.7
PDPK1-204ENST00000441549 PRKCZQ05513 592 aa25.64■■□□□ 1.7
PDPK1-204ENST00000441549 PTPROQ16827 1216 aa25.64■■□□□ 1.7
PDPK1-204ENST00000441549 WDR72Q3MJ13 1102 aa25.64■■□□□ 1.7
PDPK1-204ENST00000441549 LIN9Q5TKA1 542 aa25.64■■□□□ 1.7
PDPK1-204ENST00000441549 TOMM70O94826 608 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 RARBP10826 455 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 MESDQ14696 234 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 CLUL1Q15846 466 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 KIF12Q96FN5 646 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 ZNF518BQ9C0D4 1074 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 WNT8AQ9H1J5 351 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 DPP3Q9NY33 737 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 POLIQ9UNA4 740 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 YARSP54577 528 aaKnown RBP25.63■■□□□ 1.69
PDPK1-204ENST00000441549 C1QBPQ07021 282 aaKnown RBP25.63■■□□□ 1.69
PDPK1-204ENST00000441549 SCARA5Q6ZMJ2 495 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 UBL4BQ8N7F7 174 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 SNX27Q96L92 541 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 RNF216Q9NWF9 866 aaPredicted RBP25.63■■□□□ 1.69
PDPK1-204ENST00000441549 PCDHGC3Q9UN70 934 aa25.63■■□□□ 1.69
PDPK1-204ENST00000441549 CASP8AP2Q9UKL3 1982 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 CFHP08603 1231 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 PAEPP09466 180 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 POLR2BP30876 1174 aaKnown RBP25.62■■□□□ 1.69
PDPK1-204ENST00000441549 SP3Q02447 781 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 TMEM40Q8WWA1 233 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 HPDLQ96IR7 371 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 LRRC1Q9BTT6 524 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 EIF2AQ9BY44 585 aaKnown RBP25.62■■□□□ 1.69
PDPK1-204ENST00000441549 SNTG2Q9NY99 539 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 ADAM22Q9P0K1 906 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 CHORDC1Q9UHD1 332 aaPredicted RBP25.62■■□□□ 1.69
PDPK1-204ENST00000441549 AGAP1Q9UPQ3 857 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 RALGAPA2Q2PPJ7 1873 aa25.62■■□□□ 1.69
PDPK1-204ENST00000441549 CITO14578 2027 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 AOC2O75106 756 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 COMTP21964 271 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 RRM1P23921 792 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 TNNC1P63316 161 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 DEFB115Q30KQ5 88 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 PASD1Q8IV76 773 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 TSPAN18Q96SJ8 248 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 GTF2IRD1Q9UHL9 959 aa25.61■■□□□ 1.69
PDPK1-204ENST00000441549 NOC2LQ9Y3T9 749 aaKnown RBP25.61■■□□□ 1.69
PDPK1-204ENST00000441549 CACNB2Q08289 660 aaPredicted RBP25.6■■□□□ 1.69
PDPK1-204ENST00000441549 C8orf74Q6P047 294 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 TTC39CQ8N584 583 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 TMEM35BQ8NCS4 154 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 CD101Q93033 1021 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 ZSWIM1Q9BR11 485 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 CFHR5Q9BXR6 569 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 TRIM6Q9C030 488 aaPredicted RBP25.6■■□□□ 1.69
PDPK1-204ENST00000441549 MRPL47Q9HD33 250 aaKnown RBP25.6■■□□□ 1.69
PDPK1-204ENST00000441549 TMEM110-MUSTN1A8MSY1 372 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 CCDC188H7C350 402 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 MED7O43513 233 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 SEC31AO94979 1220 aaKnown RBP25.6■■□□□ 1.69
PDPK1-204ENST00000441549 PGK1P00558 417 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 CTNNA2P26232 953 aa25.6■■□□□ 1.69
PDPK1-204ENST00000441549 CDH5P33151 784 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms