RNA–Protein interactions for RNA: ENST00000440838.5

PSMD1-205, Transcript of proteasome 26S subunit, non-ATPase 1, human

TSL 3

Gene PSMD1, Length 761 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD1-205	ENST00000440838	KCNH3	Q9ULD8	1083 aa		12.1	□□□□□ -0.47
PSMD1-205	ENST00000440838	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.1	□□□□□ -0.47
PSMD1-205	ENST00000440838	C2CD2	Q9Y426	696 aa		12.1	□□□□□ -0.47
PSMD1-205	ENST00000440838	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.1	□□□□□ -0.47
PSMD1-205	ENST00000440838	OR6C75	A6NL08	312 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	TISP43	B9A030	160 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	ZNF197	O14709	1029 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	PPP1R37	O75864	691 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	OAZ2	O95190	189 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	PDGFB	P01127	241 aa	Predicted RBP	12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	RHO	P08100	348 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	CFH	P08603	1231 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	NFIC	P08651	508 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	TYMP	P19971	482 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	GART	P22102	1010 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	CLCN5	P51795	746 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	GUCY2F	P51841	1108 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	NUBP1	P53384	320 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	LILRA4	P59901	499 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	KCNA1	Q09470	495 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	IER5L	Q5T953	404 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	C9orf57	Q5W0N0	161 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	OVOS1	Q6IE37	1185 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	METTL23	Q86XA0	190 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	NT5DC4	Q86YG4	428 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	FLCN	Q8NFG4	579 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	FGF13	Q92913	245 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	SENP8	Q96LD8	212 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	PYM1	Q9BRP8	204 aa	Known RBP	12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	FAM213A	Q9BRX8	229 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	STRA6	Q9BX79	667 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	HCFC1R1	Q9NWW0	138 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	WNT16	Q9UBV4	365 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	AFF4	Q9UHB7	1163 aa	Known RBP	12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	DSE	Q9UL01	958 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	WDFY4	Q6ZS81	3184 aa		12.09	□□□□□ -0.47
PSMD1-205	ENST00000440838	DENND4A	Q7Z401	1863 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	FRMD3	A2A2Y4	597 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	KIAA0391	O15091	583 aa	Known RBP	12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	POLR2D	O15514	142 aa	Known RBP	12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	PRPF6	O94906	941 aa	Known RBP	12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	SRF	P11831	508 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	ADSS	P30520	456 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	AARS	P49588	968 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	TAF6	P49848	677 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	VCP	P55072	806 aa	Known RBP	12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	ASIC1	P78348	528 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	PLD1	Q13393	1074 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	ASTL	Q6HA08	431 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	SHC4	Q6S5L8	630 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	PDZD4	Q76G19	769 aa	Predicted RBP	12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	SIX5	Q8N196	739 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	THEM5	Q8N1Q8	247 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	ITFG1	Q8TB96	612 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	CORO1B	Q9BR76	489 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	MAGEF1	Q9HAY2	307 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	KBTBD4	Q9NVX7	518 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	INSL5	Q9Y5Q6	135 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	NUMBL	Q9Y6R0	609 aa		12.08	□□□□□ -0.48
PSMD1-205	ENST00000440838	ANO9	A1A5B4	782 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	ANHX	E9PGG2	379 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	PIR	O00625	290 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	CYB561D2	O14569	222 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	NARS	O43776	548 aa	Known RBP	12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	EXTL3	O43909	919 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	SEC24A	O95486	1093 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	PNPLA4	P41247	253 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	ALDH1A3	P47895	512 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	CASP5	P51878	434 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	TFAM	Q00059	246 aa	Known RBP	12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	NHLH1	Q02575	133 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	DNM1	Q05193	864 aa	Known RBP	12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	TWF1	Q12792	350 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	HTR4	Q13639	388 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	MYBPC2	Q14324	1141 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	E2F4	Q16254	413 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	SV2C	Q496J9	727 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	PARM1	Q6UWI2	310 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	RNF19B	Q6ZMZ0	732 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	CEP57L1	Q8IYX8	460 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	TMEM130	Q8N3G9	435 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	LEMD2	Q8NC56	503 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	SAAL1	Q96ER3	474 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	MCRS1	Q96EZ8	462 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	ZNF560	Q96MR9	790 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	PGLYRP2	Q96PD5	576 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	RTP3	Q9BQQ7	232 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	TRIM9	Q9C026	710 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	IKZF4	Q9H2S9	585 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	PCIF1	Q9H4Z3	704 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	AVEN	Q9NQS1	362 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	RBAK	Q9NYW8	714 aa	Predicted RBP	12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	GDE1	Q9NZC3	331 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	PCDHA7	Q9UN72	937 aa		12.07	□□□□□ -0.48
PSMD1-205	ENST00000440838	DOCK6	Q96HP0	2047 aa		12.06	□□□□□ -0.48
PSMD1-205	ENST00000440838	PDCD11	Q14690	1871 aa	Known RBP	12.06	□□□□□ -0.48
PSMD1-205	ENST00000440838	ZDBF2	Q9HCK1	2354 aa		12.06	□□□□□ -0.48
PSMD1-205	ENST00000440838	MUC6	Q6W4X9	2439 aa		12.06	□□□□□ -0.48
PSMD1-205	ENST00000440838	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms