RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CBWD2Q8IUF1 395 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 ZNF707Q96C28 371 aaPredicted RBP25.58■■□□□ 1.69
VARS-217ENST00000440048 RHOBTB2Q9BYZ6 727 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 PDE11AQ9HCR9 933 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 TSHZ2Q9NRE2 1034 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 FBXL5Q9UKA1 691 aa25.58■■□□□ 1.69
VARS-217ENST00000440048 ZNF233A6NK53 670 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 SPTLC1O15269 473 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 DCXO43602 365 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 PAX3P23760 479 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 TFAMQ00059 246 aaKnown RBP25.57■■□□□ 1.68
VARS-217ENST00000440048 DPYDQ12882 1025 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 CTXN3Q4LDR2 81 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 LIN9Q5TKA1 542 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 FMR1NBQ8N0W7 255 aaPredicted RBP25.57■■□□□ 1.68
VARS-217ENST00000440048 SMG7Q92540 1137 aaKnown RBP25.57■■□□□ 1.68
VARS-217ENST00000440048 KIAA1586Q9HCI6 787 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 NR2E1Q9Y466 385 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 TIMM13Q9Y5L4 95 aaPredicted RBP25.57■■□□□ 1.68
VARS-217ENST00000440048 DOCK6Q96HP0 2047 aa25.57■■□□□ 1.68
VARS-217ENST00000440048 COL9A1P20849 921 aa25.56■■□□□ 1.68
VARS-217ENST00000440048 CYP2J2P51589 502 aa25.56■■□□□ 1.68
VARS-217ENST00000440048 ROR1Q01973 937 aa25.56■■□□□ 1.68
VARS-217ENST00000440048 ZNF280DQ6N043 979 aa25.56■■□□□ 1.68
VARS-217ENST00000440048 CACTINQ8WUQ7 758 aaKnown RBP25.56■■□□□ 1.68
VARS-217ENST00000440048 FAM84AQ96KN4 292 aa25.56■■□□□ 1.68
VARS-217ENST00000440048 SENP8Q96LD8 212 aa25.56■■□□□ 1.68
VARS-217ENST00000440048 PRKD2Q9BZL6 878 aa25.56■■□□□ 1.68
VARS-217ENST00000440048 CGNQ9P2M7 1197 aaKnown RBP25.56■■□□□ 1.68
VARS-217ENST00000440048 OAZ2O95190 189 aa25.55■■□□□ 1.68
VARS-217ENST00000440048 C8AP07357 584 aa25.55■■□□□ 1.68
VARS-217ENST00000440048 ARPP19P56211 112 aa25.55■■□□□ 1.68
VARS-217ENST00000440048 YWHAHQ04917 246 aaPredicted RBP25.55■■□□□ 1.68
VARS-217ENST00000440048 ZNF461Q8TAF7 563 aa25.55■■□□□ 1.68
VARS-217ENST00000440048 CCDC47Q96A33 483 aaKnown RBP25.55■■□□□ 1.68
VARS-217ENST00000440048 WDR27A2RRH5 827 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 C2CD4DB7Z1M9 353 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 ABLIM3O94929 683 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 RHOBTB3O94955 611 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 TYMPP19971 482 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 TAF6P49848 677 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 PPM1LQ5SGD2 360 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 CCDC149Q6ZUS6 474 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 USP37Q86T82 979 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 C12orf56Q8IXR9 622 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 C1orf127Q8N9H9 656 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 XXYLT1Q8NBI6 393 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 RDH13Q8NBN7 331 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 ENGASEQ8NFI3 743 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 SLC7A14Q8TBB6 771 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 LRFN3Q9BTN0 628 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 PIDD1Q9HB75 910 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 MUTYHQ9UIF7 546 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 MYO10Q9HD67 2058 aa25.54■■□□□ 1.68
VARS-217ENST00000440048 TSC2P49815 1807 aa25.53■■□□□ 1.68
VARS-217ENST00000440048 HNRNPA1P09651 372 aaKnown RBP eCLIP25.53■■□□□ 1.68
VARS-217ENST00000440048 ODC1P11926 461 aa25.53■■□□□ 1.68
VARS-217ENST00000440048 SNW1Q13573 536 aaKnown RBP25.53■■□□□ 1.68
VARS-217ENST00000440048 SURF1Q15526 300 aa25.53■■□□□ 1.68
VARS-217ENST00000440048 SNRNP35Q16560 246 aaKnown RBP25.53■■□□□ 1.68
VARS-217ENST00000440048 UVSSAQ2YD98 709 aa25.53■■□□□ 1.68
VARS-217ENST00000440048 GOLGA5Q8TBA6 731 aa25.53■■□□□ 1.68
VARS-217ENST00000440048 WDR6Q9NNW5 1121 aaKnown RBP25.53■■□□□ 1.68
VARS-217ENST00000440048 USTQ9Y2C2 406 aa25.53■■□□□ 1.68
VARS-217ENST00000440048 ITGB3P05106 788 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 POLR2BP30876 1174 aaKnown RBP25.52■■□□□ 1.68
VARS-217ENST00000440048 HOXA9P31269 272 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 ANP32AP39687 249 aaKnown RBP25.52■■□□□ 1.68
VARS-217ENST00000440048 FAM160A1Q05DH4 1040 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 LMBRD2Q68DH5 695 aaPredicted RBP25.52■■□□□ 1.68
VARS-217ENST00000440048 SCARA3Q6AZY7 606 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 OVOS1Q6IE37 1185 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 TDRD5Q8NAT2 981 aaKnown RBP25.52■■□□□ 1.68
VARS-217ENST00000440048 CXorf38Q8TB03 319 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 BORCS6Q96GS4 357 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 CCDC34Q96HJ3 373 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 ZNF560Q96MR9 790 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 MTMR12Q9C0I1 747 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 KCTD10Q9H3F6 313 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 INTS13Q9NVM9 706 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 AGAP1Q9UPQ3 857 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 PTPRJQ12913 1337 aa25.52■■□□□ 1.68
VARS-217ENST00000440048 ARHGEF37A1IGU5 675 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 CCL16O15467 120 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 CYP11A1P05108 521 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 TMEM191BP0C7N4 346 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 ATF2P15336 505 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 KCNB1Q14721 858 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 SV2CQ496J9 727 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 TPGS2Q68CL5 300 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 RTL10Q7L3V2 364 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 CSGALNACT2Q8N6G5 542 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 OR5B17Q8NGF7 314 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 ANKRD36BP1Q96IX9 119 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 OXCT2Q9BYC2 517 aaPredicted RBP25.51■■□□□ 1.67
VARS-217ENST00000440048 ITGA11Q9UKX5 1188 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 CLUHO75153 1309 aa25.51■■□□□ 1.67
VARS-217ENST00000440048 OR6C75A6NL08 312 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 KPNA7A9QM74 516 aa25.5■■□□□ 1.67
VARS-217ENST00000440048 CYB561D2O14569 222 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms