RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GTF3C4Q9UKN8 822 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 AFG3L2Q9Y4W6 797 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 MAD1L1Q9Y6D9 718 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 TRPA1O75762 1119 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 GUCY1A3Q02108 690 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ITIH3Q06033 890 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 SLMAPQ14BN4 828 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 GJC2Q5T442 439 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 GKAP1Q5VSY0 366 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 HPDLQ96IR7 371 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 PORCNQ9H237 461 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 RGS17Q9UGC6 210 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZNF214Q9UL59 606 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 COL22A1Q8NFW1 1626 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 MYH6P13533 1939 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 NPTXRO95502 500 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 BRD2P25440 801 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 PHBP35232 272 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 RGS2P41220 211 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ATP11AP98196 1134 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 HHATQ5VTY9 493 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ARHGEF19Q8IW93 802 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 CGRRF1Q99675 332 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 SETD4Q9NVD3 440 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 TBK1Q9UHD2 729 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 NFASCO94856 1347 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ABCA3Q99758 1704 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ARHGEF37A1IGU5 675 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZC3H11AO75152 810 aaKnown RBP eCLIP12.25□□□□□ -0.454e-6■■■■□ 23.4
TRAPPC9-202ENST00000438773 LYPLA2O95372 231 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 ACSL3O95573 720 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 CPT1AP50416 773 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 YWHAGP61981 247 aaKnown RBP eCLIP12.25□□□□□ -0.454e-6■■■■□ 21.9
TRAPPC9-202ENST00000438773 NOGQ13253 232 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 BMT2Q1RMZ1 405 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 GLRA4Q5JXX5 417 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 LGSNQ5TDP6 509 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 AENQ8WTP8 325 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 SREK1Q8WXA9 508 aaKnown RBP12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 WNK4Q96J92 1243 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 VTA1Q9NP79 307 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 KLHL11Q9NVR0 708 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 CHD4Q14839 1912 aa12.25□□□□□ -0.45
TRAPPC9-202ENST00000438773 GRIN2DO15399 1336 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 TTI1O43156 1089 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 KRT7P08729 469 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 PDGFRBP09619 1106 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 RGS7P49802 495 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 ERFP50548 548 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 MYL6P60660 151 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 SETDB1Q15047 1291 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 TTMPQ5BVD1 217 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 NOTUMQ6P988 496 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 ILDR2Q71H61 639 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZNF677Q86XU0 584 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 CCDC13Q8IYE1 715 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 TTC7AQ9ULT0 858 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 SNCAIPQ9Y6H5 919 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.458e-8■■■■■ 34.7
TRAPPC9-202ENST00000438773 CELF3Q5SZQ8 465 aaKnown RBP12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 ACAD10Q6JQN1 1059 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 FOXR2Q6PJQ5 311 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 TBC1D1Q86TI0 1168 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 ASAP3Q8TDY4 903 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 BAP1Q92560 729 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 N4BP2L2Q92802 583 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 KAT5Q92993 513 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 MCEEQ96PE7 176 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 SALL4Q9UJQ4 1053 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 PLAAQ9Y263 795 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 PHF20L1A8MW92 1017 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 CXCL8P10145 99 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 GLRA2P23416 452 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 STX2P32856 288 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 SLC1A1P43005 524 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 TFDP2Q14188 446 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 CCDC117Q8IWD4 279 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 USP38Q8NB14 1042 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 CPB2Q96IY4 423 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 TTYH3Q9C0H2 523 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 FAM49BQ9NUQ9 324 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 BTBD7Q9P203 1132 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 HEY1Q9Y5J3 304 aa12.24□□□□□ -0.45
TRAPPC9-202ENST00000438773 STAG3L1P0CL83 205 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 GZMAP12544 262 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 NR1D1P20393 614 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 FCGRTP55899 365 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 CCHCR1Q8TD31 782 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 NSMCE1Q8WV22 266 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 NMRK2Q9NPI5 230 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZBED1O96006 694 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 NOVP48745 357 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 BBS9Q3SYG4 887 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZPBP2Q6X784 338 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 C1orf131Q8NDD1 294 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
TRAPPC9-202ENST00000438773 NT5C1AQ9BXI3 368 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms