RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 RPL9P32969 192 aaKnown RBP24.68■■□□□ 1.54
CPSF4-204ENST00000436336 ASIC2Q16515 512 aa24.68■■□□□ 1.54
CPSF4-204ENST00000436336 TMTC1Q8IUR5 882 aa24.68■■□□□ 1.54
CPSF4-204ENST00000436336 BADQ92934 168 aa24.68■■□□□ 1.54
CPSF4-204ENST00000436336 ARID3AQ99856 593 aa24.68■■□□□ 1.54
CPSF4-204ENST00000436336 NXF1Q9UBU9 619 aaKnown RBP24.68■■□□□ 1.54
CPSF4-204ENST00000436336 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.68■■□□□ 1.54
CPSF4-204ENST00000436336 PTPRSQ13332 1948 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 CCDC172P0C7W6 258 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 SKILP12757 684 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 ASPAP45381 313 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 TAF6P49848 677 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 FPGSQ05932 587 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 CYP26C1Q6V0L0 522 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 UROC1Q96N76 676 aa24.67■■□□□ 1.54
CPSF4-204ENST00000436336 CCDC85CA6NKD9 419 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 ACRP10323 421 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 TNNC1P63316 161 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 SV2CQ496J9 727 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 IRF2BP2Q7Z5L9 587 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 DDX27Q96GQ7 796 aaKnown RBP24.66■■□□□ 1.54
CPSF4-204ENST00000436336 BCO2Q9BYV7 579 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 POLIQ9UNA4 740 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 GFPT2O94808 682 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 AMHP03971 560 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 SERPING1P05155 500 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 PNMA6AP0CW24 399 aaPredicted RBP24.66■■□□□ 1.54
CPSF4-204ENST00000436336 CLCNKBP51801 687 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 YWHAEP62258 255 aaKnown RBP24.66■■□□□ 1.54
CPSF4-204ENST00000436336 FAM71AQ8IYT1 594 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 CASD1Q96PB1 797 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 CHP1Q99653 195 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 TBC1D13Q9NVG8 400 aa24.66■■□□□ 1.54
CPSF4-204ENST00000436336 CASTOR2A6NHX0 329 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 PODXLO00592 558 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 ARHGAP6O43182 974 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 ACO1P21399 889 aaKnown RBP24.65■■□□□ 1.54
CPSF4-204ENST00000436336 PRKCIP41743 596 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 ARID5AQ03989 594 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 UPP1Q16831 310 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 HGSNATQ68CP4 663 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 UBR7Q8N806 425 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 FAM124BQ9H5Z6 455 aaPredicted RBP24.65■■□□□ 1.54
CPSF4-204ENST00000436336 CYP3A43Q9HB55 503 aa24.65■■□□□ 1.54
CPSF4-204ENST00000436336 BZW2Q9Y6E2 419 aaKnown RBP24.65■■□□□ 1.54
CPSF4-204ENST00000436336 KPNA7A9QM74 516 aa24.64■■□□□ 1.54
CPSF4-204ENST00000436336 DSC1Q08554 894 aa24.64■■□□□ 1.54
CPSF4-204ENST00000436336 SCARA5Q6ZMJ2 495 aa24.64■■□□□ 1.54
CPSF4-204ENST00000436336 TOP1MTQ969P6 601 aa24.64■■□□□ 1.54
CPSF4-204ENST00000436336 MRPL9Q9BYD2 267 aaKnown RBP24.64■■□□□ 1.54
CPSF4-204ENST00000436336 GDAP2Q9NXN4 497 aa24.64■■□□□ 1.54
CPSF4-204ENST00000436336 ARHGAP20Q9P2F6 1191 aa24.64■■□□□ 1.54
CPSF4-204ENST00000436336 CNTN6Q9UQ52 1028 aa24.64■■□□□ 1.54
CPSF4-204ENST00000436336 USP8P40818 1118 aa24.64■■□□□ 1.53
CPSF4-204ENST00000436336 LILRA4P59901 499 aa24.64■■□□□ 1.53
CPSF4-204ENST00000436336 WDR5P61964 334 aaKnown RBP24.64■■□□□ 1.53
CPSF4-204ENST00000436336 RNASELQ05823 741 aaKnown RBP24.64■■□□□ 1.53
CPSF4-204ENST00000436336 KLHL30Q0D2K2 578 aa24.64■■□□□ 1.53
CPSF4-204ENST00000436336 C16orf59Q7L2K0 433 aa24.64■■□□□ 1.53
CPSF4-204ENST00000436336 FAM193BQ96PV7 902 aaPredicted RBP24.64■■□□□ 1.53
CPSF4-204ENST00000436336 CISHQ9NSE2 258 aa24.64■■□□□ 1.53
CPSF4-204ENST00000436336 SNX9Q9Y5X1 595 aa24.64■■□□□ 1.53
CPSF4-204ENST00000436336 DDHD2O94830 711 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 FGBP02675 491 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 WEE2P0C1S8 567 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 KRT5P13647 590 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 TDRD12Q587J7 1177 aaKnown RBP24.63■■□□□ 1.53
CPSF4-204ENST00000436336 GPIHBP1Q8IV16 184 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 MMS19Q96T76 1030 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 PCDH10Q9P2E7 1040 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 CACNG4Q9UBN1 327 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 PCDHB4Q9Y5E5 795 aa24.63■■□□□ 1.53
CPSF4-204ENST00000436336 SSU72P8A0A1W2PR75 194 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 SOWAHDA6NJG2 315 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 SPTLC1O15269 473 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 UPP2O95045 317 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 SYN1P17600 705 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 PAX3P23760 479 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 GATMP50440 423 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 MAPK8IP2Q13387 824 aaPredicted RBP24.62■■□□□ 1.53
CPSF4-204ENST00000436336 ZNF280BQ86YH2 543 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 COLGALT2Q8IYK4 626 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 TTC39CQ8N584 583 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 DPF3Q92784 378 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 PAAF1Q9BRP4 392 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 HAUS4Q9H6D7 363 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 SMYD3Q9H7B4 428 aa24.62■■□□□ 1.53
CPSF4-204ENST00000436336 NHEJ1Q9H9Q4 299 aaPredicted RBP24.62■■□□□ 1.53
CPSF4-204ENST00000436336 TBKBP1A7MCY6 615 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 DGKIO75912 1065 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 CD58P19256 250 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 CLCN1P35523 988 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 KCNJ6P48051 423 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 PSRC1Q6PGN9 363 aaPredicted RBP24.61■■□□□ 1.53
CPSF4-204ENST00000436336 TMEM270Q6UE05 265 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 ZNF365Q70YC5 407 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 OTOP2Q7RTS6 562 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 CCDC170Q8IYT3 715 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 SDCBP2Q9H190 292 aa24.61■■□□□ 1.53
CPSF4-204ENST00000436336 COL4A6Q14031 1691 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms