RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 SUSD3Q96L08 255 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 FAM81BQ96LP2 452 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 MMS19Q96T76 1030 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 HERC2P3Q9BVR0 1158 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 VPS16Q9H269 839 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 CERS4Q9HA82 394 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 MARCH5Q9NX47 278 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 CACNG4Q9UBN1 327 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 COQ4Q9Y3A0 265 aa17.77■□□□□ 0.44
CTDSPL-204ENST00000435525 LRRC10BA6NIK2 292 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 H7C4K7 107 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 CYB561D2O14569 222 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 SOD2P04179 222 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 ITGB1P05556 798 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 LINC00271P0C7V0 271 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 CA8P35219 290 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 EXOC3L4Q17RC7 722 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 WDR72Q3MJ13 1102 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 CBWD6Q4V339 395 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 CBWD3Q5JTY5 395 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 CBWD5Q5RIA9 395 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 DPH6Q7L8W6 267 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 TMC7Q7Z402 723 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 CEP57Q86XR8 500 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 GPR65Q8IYL9 337 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 VPS52Q8N1B4 723 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 SPATA18Q8TC71 538 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 TAS1R2Q8TE23 839 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 SENP8Q96LD8 212 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 NT5C1BQ96P26 610 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 TTPALQ9BTX7 342 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 OXCT2Q9BYC2 517 aaPredicted RBP17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 VRTNQ9H8Y1 702 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 NGRNQ9NPE2 291 aaKnown RBP17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 ENTPD7Q9NQZ7 604 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 TLR9Q9NR96 1032 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 MRPL17Q9NRX2 175 aaKnown RBP17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 GDAP2Q9NXN4 497 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 SNX9Q9Y5X1 595 aa17.76■□□□□ 0.43
CTDSPL-204ENST00000435525 RALGAPA2Q2PPJ7 1873 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 TNRC18O15417 2968 aaPredicted RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 LGALS16A8MUM7 142 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 PPEF2O14830 753 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 CBFA2T2O43439 604 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 ARHGEF15O94989 841 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 VNN1O95497 513 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 ASS1P00966 412 aaKnown RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 CST3P01034 146 aaPredicted RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 FAM163BP0C2L3 166 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 TYMPP19971 482 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 BRCC3P46736 316 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 GLUD2P49448 558 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 AARSP49588 968 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 YWHAEP62258 255 aaKnown RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 NOP14P78316 857 aaKnown RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 TIGD5Q53EQ6 642 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 ANKS3Q6ZW76 656 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 THEM5Q8N1Q8 247 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 TMEM86AQ8N2M4 240 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 TTC39CQ8N584 583 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 TOP6BLQ8N6T0 577 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 EHBP1Q8NDI1 1231 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 C3orf58Q8NDZ4 430 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 SPPL3Q8TCT6 385 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 POF1BQ8WVV4 589 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 PCMTD1Q96MG8 357 aaPredicted RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 ALG13Q9NP73 1137 aaKnown RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 GCNT4Q9P109 453 aa17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 NXF1Q9UBU9 619 aaKnown RBP17.75■□□□□ 0.43
CTDSPL-204ENST00000435525 CITO14578 2027 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 M0QZQ0 153 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 ATP1A3P13637 1013 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 TBXAS1P24557 533 aaPredicted RBP17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 UBXN1Q04323 297 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 SMC1AQ14683 1233 aaKnown RBP17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 TMEM173Q86WV6 379 aaPredicted RBP17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 CXorf38Q8TB03 319 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 FAM84AQ96KN4 292 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 GPR62Q9BZJ7 368 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 NIF3L1Q9GZT8 377 aa17.74■□□□□ 0.43
CTDSPL-204ENST00000435525 FNDC1Q4ZHG4 1894 aaPredicted RBP17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 F8W810 466 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 CTSAP10619 480 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 FGFR3P22607 806 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 LHX1P48742 406 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 FANCCQ00597 558 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 YWHAHQ04917 246 aaPredicted RBP17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 MIIPQ5JXC2 388 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 ZNF280DQ6N043 979 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 BCL7CQ8WUZ0 217 aaPredicted RBP17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 RIN2Q8WYP3 895 aaPredicted RBP17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 GAS2L1Q99501 681 aaPredicted RBP17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 TCF25Q9BQ70 676 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 INTS2Q9H0H0 1204 aaKnown RBP17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 XYLT2Q9H1B5 865 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 SNX25Q9H3E2 840 aa17.73■□□□□ 0.43
CTDSPL-204ENST00000435525 FAM124BQ9H5Z6 455 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms