RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 PGBD1Q96JS3 809 aa11.32□□□□□ -0.6
LINC01090-202ENST00000434418 FOXP3Q9BZS1 431 aa11.32□□□□□ -0.6
LINC01090-202ENST00000434418 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
LINC01090-202ENST00000434418 SLAMF8Q9P0V8 285 aa11.32□□□□□ -0.6
LINC01090-202ENST00000434418 SUSD2Q9UGT4 822 aa11.32□□□□□ -0.6
LINC01090-202ENST00000434418 ZNF215Q9UL58 517 aaPredicted RBP11.32□□□□□ -0.6
LINC01090-202ENST00000434418 SIP14410 1827 aa11.32□□□□□ -0.6
LINC01090-202ENST00000434418 EMSYQ7Z589 1322 aa11.32□□□□□ -0.6
LINC01090-202ENST00000434418 LPXNO60711 386 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 KCNA2P16389 499 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 ATP2B1P20020 1258 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 MARK3P27448 753 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 KCNQ1P51787 676 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 MTMR1Q13613 665 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 WWC2Q6AWC2 1192 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 XRRA1Q6P2D8 792 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 MYOCDQ8IZQ8 938 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 ZNF655Q8N720 491 aaPredicted RBP11.31□□□□□ -0.6
LINC01090-202ENST00000434418 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
LINC01090-202ENST00000434418 TCF20Q9UGU0 1960 aaKnown RBP11.3□□□□□ -0.6
LINC01090-202ENST00000434418 LINC01553A4QN01 128 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 KLF4O43474 513 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 EFCAB14O75071 495 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 STK10O94804 968 aaKnown RBP11.3□□□□□ -0.6
LINC01090-202ENST00000434418 AMHP03971 560 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 CPA1P15085 419 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC01090-202ENST00000434418 NAPAP54920 295 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 TEKQ02763 1124 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 PLEKHG4Q58EX7 1191 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 HEATR6Q6AI08 1181 aaKnown RBP11.3□□□□□ -0.6
LINC01090-202ENST00000434418 MRM1Q6IN84 353 aaKnown RBP11.3□□□□□ -0.6
LINC01090-202ENST00000434418 SYNE3Q6ZMZ3 975 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 CBLL1Q75N03 491 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 SGMS1Q86VZ5 419 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 ZBTB10Q96DT7 871 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 ALPK1Q96QP1 1244 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 RAD9AQ99638 391 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 SENP7Q9BQF6 1050 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 ST7Q9NRC1 585 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 NAP1L2Q9ULW6 460 aaPredicted RBP11.3□□□□□ -0.6
LINC01090-202ENST00000434418 UBIAD1Q9Y5Z9 338 aa11.3□□□□□ -0.6
LINC01090-202ENST00000434418 KLF18A0A0U1RQI7 1052 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 H0Y8X5 98 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 ZBTB43O43298 467 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 CDC45O75419 566 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 GNAT1P11488 350 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 POU3F3P20264 500 aaPredicted RBP11.29□□□□□ -0.6
LINC01090-202ENST00000434418 ADAM17P78536 824 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 PPFIA1Q13136 1202 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 FAM178BQ8IXR5 827 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 GIMAP8Q8ND71 665 aaPredicted RBP11.29□□□□□ -0.6
LINC01090-202ENST00000434418 CYP2W1Q8TAV3 490 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 SEPT8Q92599 483 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 GLG1Q92896 1179 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
LINC01090-202ENST00000434418 UHRF1Q96T88 793 aaPredicted RBP11.29□□□□□ -0.6
LINC01090-202ENST00000434418 C17orf80Q9BSJ5 609 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 NOL6Q9H6R4 1146 aaKnown RBP11.29□□□□□ -0.6
LINC01090-202ENST00000434418 C19orf73Q9NVV2 129 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 TMEM260Q9NX78 707 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 APEX2Q9UBZ4 518 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 TCFL5Q9UL49 500 aa11.29□□□□□ -0.6
LINC01090-202ENST00000434418 XIRP2A4UGR9 3374 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
LINC01090-202ENST00000434418 GOLGA8AA7E2F4 631 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 GOLGA8BA8MQT2 603 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 CHRNA1P02708 482 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 SYPP08247 313 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 GHRP10912 638 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 ITGA4P13612 1032 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 ADCY7P51828 1080 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 ERVK-21P61565 698 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 IGBP1P78318 339 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 EXOSC10Q01780 885 aaKnown RBP11.28□□□□□ -0.6
LINC01090-202ENST00000434418 ZPBP2Q6X784 338 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 FIBCD1Q8N539 461 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 SEPT1Q8WYJ6 367 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 CDHR1Q96JP9 859 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 IFIH1Q9BYX4 1025 aaKnown RBP11.28□□□□□ -0.6
LINC01090-202ENST00000434418 ADAMTS10Q9H324 1103 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 JADE2Q9NQC1 790 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
LINC01090-202ENST00000434418 PRR13Q9NZ81 148 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 TUBE1Q9UJT0 475 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 FHOD1Q9Y613 1164 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 NRCAMQ92823 1304 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 KAT6AQ92794 2004 aa11.28□□□□□ -0.6
LINC01090-202ENST00000434418 STXBP3O00186 592 aa11.27□□□□□ -0.61
LINC01090-202ENST00000434418 CAND2O75155 1236 aa11.27□□□□□ -0.61
LINC01090-202ENST00000434418 ARP10275 920 aa11.27□□□□□ -0.61
LINC01090-202ENST00000434418 TCEAL1Q15170 157 aa11.27□□□□□ -0.61
LINC01090-202ENST00000434418 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
LINC01090-202ENST00000434418 TRAPPC12Q8WVT3 735 aa11.27□□□□□ -0.61
LINC01090-202ENST00000434418 DNAJB3Q8WWF6 145 aa11.27□□□□□ -0.61
LINC01090-202ENST00000434418 UIMC1Q96RL1 719 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms