RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 LILRA4P59901 499 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 CLUL1Q15846 466 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 DCAF17Q5H9S7 520 aaPredicted RBP16.73■□□□□ 0.27
TREX1-201ENST00000433541 CCDC183Q5T5S1 534 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 KIAA0319Q5VV43 1072 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 ELMSAN1Q6PJG2 1045 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 METTL23Q86XA0 190 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 PALB2Q86YC2 1186 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 CREBRFQ8IUR6 639 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 EFHBQ8N7U6 833 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 PARD3BQ8TEW8 1205 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 SENP8Q96LD8 212 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 KLHL5Q96PQ7 755 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 BARX2Q9UMQ3 279 aaPredicted RBP16.73■□□□□ 0.27
TREX1-201ENST00000433541 PCDHB8Q9UN66 801 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 COG5Q9UP83 839 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
TREX1-201ENST00000433541 TSC2P49815 1807 aa16.73■□□□□ 0.27
TREX1-201ENST00000433541 ANO9A1A5B4 782 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 KPNA7A9QM74 516 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 H3BQ06 376 aaPredicted RBP16.72■□□□□ 0.27
TREX1-201ENST00000433541 PIRO00625 290 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 TEX28O15482 410 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 GLUD1P00367 558 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 FGFR3P22607 806 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 PAX3P23760 479 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 AP3M2P53677 418 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 YWHAHQ04917 246 aaPredicted RBP16.72■□□□□ 0.27
TREX1-201ENST00000433541 CTXN3Q4LDR2 81 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 VARS2Q5ST30 1063 aaKnown RBP16.72■□□□□ 0.27
TREX1-201ENST00000433541 ZNF280DQ6N043 979 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 CAVIN1Q6NZI2 390 aaKnown RBP16.72■□□□□ 0.27
TREX1-201ENST00000433541 CD300LGQ6UXG3 332 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 MLKLQ8NB16 471 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 TMC2Q8TDI7 906 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 CASP10Q92851 521 aa16.72■□□□□ 0.27
TREX1-201ENST00000433541 CYB561D2O14569 222 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 MAPK13O15264 365 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 SLC16A3O15427 465 aaKnown RBP16.71■□□□□ 0.27
TREX1-201ENST00000433541 HUS1O60921 280 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 SLC34A2O95436 690 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
TREX1-201ENST00000433541 EFEMP2O95967 443 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 TRIM49P0CI25 452 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 TRIM49CP0CI26 452 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 CPB1P15086 417 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 NLRP12P59046 1061 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 DLG4P78352 724 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.27
TREX1-201ENST00000433541 AAK1Q2M2I8 961 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 OVOS1Q6IE37 1185 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
TREX1-201ENST00000433541 TMEM174Q8WUU8 243 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 HPDLQ96IR7 371 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 MMS19Q96T76 1030 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 MKNK1Q9BUB5 465 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 APOL5Q9BWW9 433 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 FNIP2Q9P278 1114 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 DSEQ9UL01 958 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 SNX9Q9Y5X1 595 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 HCFC2Q9Y5Z7 792 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 CDY1Q9Y6F8 540 aa16.71■□□□□ 0.27
TREX1-201ENST00000433541 M0QZQ0 153 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 SPTLC1O15269 473 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 STX10O60499 249 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 SPATA31D3P0C874 917 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 EPCAMP16422 314 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 OR1D2P34982 312 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 PIK3CAP42336 1068 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 TFF2Q03403 129 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 ADAM15Q13444 863 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 DPCR1Q3MIW9 517 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 SPATA31D4Q6ZUB0 917 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 PLEKHO2Q8TD55 490 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 CEP63Q96MT8 703 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 MTRRQ9UBK8 725 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
TREX1-201ENST00000433541 DPP7Q9UHL4 492 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 SIX4Q9UIU6 781 aa16.7■□□□□ 0.26
TREX1-201ENST00000433541 LILRB3O75022 631 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 TBX10O75333 385 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 GCLMP48507 274 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 CLCN4P51793 760 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 TNNC1P63316 161 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 NCOA4Q13772 614 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 ZNF699Q32M78 642 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 TDRD10Q5VZ19 366 aaKnown RBP16.69■□□□□ 0.26
TREX1-201ENST00000433541 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
TREX1-201ENST00000433541 GPR65Q8IYL9 337 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 THEM5Q8N1Q8 247 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 CCDC150Q8NCX0 1101 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 ZNF516Q92618 1163 aa16.69■□□□□ 0.26
TREX1-201ENST00000433541 SRRTQ9BXP5 876 aaKnown RBP16.69■□□□□ 0.26
TREX1-201ENST00000433541 IMPG2Q9BZV3 1241 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms