RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MAN1C1Q9NR34 630 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 ZNHIT2Q9UHR6 403 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 SORCS3Q9UPU3 1222 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 PCDHGB6Q9Y5F9 930 aa3.7□□□□□ -1.82
HMGB1P9-201ENST00000429856 GAGE12BA1L429 117 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 GAGE12HA6NDE8 117 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 GRXCR1A8MXD5 290 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 PIP5K1CO60331 668 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 SCAF4O95104 1147 aaKnown RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 FGAP02671 866 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 ERBB2P04626 1255 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 HSPA6P17066 643 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 AKAP5P24588 427 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 CD38P28907 300 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 PCSK1P29120 753 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 APOBEC3AP31941 199 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 ALDH5A1P51649 535 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 C21orf58P58505 322 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 CTXN1P60606 82 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 RAP2BP61225 183 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 RALBP1Q15311 655 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 TUBB8Q3ZCM7 444 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 LONRF3Q496Y0 759 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 ATAT1Q5SQI0 421 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 SWSAP1Q6NVH7 229 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 SYCE2Q6PIF2 218 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 TOGARAM2Q6ZUX3 1019 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 PLXDC1Q8IUK5 500 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 GRAMD1CQ8IYS0 662 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 SYNE4Q8N205 404 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 FAM156AQ8NDB6 213 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 FBXO18Q8NFZ0 1043 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 NLGN4YQ8NFZ3 816 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 SLC35B2Q8TB61 432 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 CPT1CQ8TCG5 803 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 SLC25A43Q8WUT9 341 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 HAS1Q92839 578 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 HPS3Q969F9 1004 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 GJA10Q969M2 543 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 APOL5Q9BWW9 433 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 C11orf54Q9H0W9 315 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 C1orf112Q9NSG2 853 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 GNL3LQ9NVN8 582 aaKnown RBP3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 CALCOCO1Q9P1Z2 691 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 PNMA2Q9UL42 364 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 LIMCH1Q9UPQ0 1083 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 ACTL7AQ9Y615 435 aa3.69□□□□□ -1.82
HMGB1P9-201ENST00000429856 RNASET2O00584 256 aaKnown RBP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 SH3BP5O60239 455 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 CTNND1O60716 968 aaKnown RBP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 OFD1O75665 1012 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 TCEA3O75764 348 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 ARIH2O95376 493 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 LMNAP02545 664 aaKnown RBP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 AMY1AP04745 511 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 POU2F2P09086 479 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 U2AF1L5P0DN76 240 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 MTHFD1P11586 935 aaKnown RBP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 CDK4P11802 303 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 PHKG2P15735 406 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 ITGB6P18564 788 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 FPR1P21462 350 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 EDNRBP24530 442 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 IRX6P78412 446 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 MXRA7P84157 204 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 U2AF1Q01081 240 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 NHLH2Q02577 135 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 TARDBPQ13148 414 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 UBXN2BQ14CS0 331 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 LONRF1Q17RB8 773 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 C3orf36Q3SXR2 165 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 DACT2Q5SW24 774 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 THEMIS2Q5TEJ8 643 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 ARMC6Q6NXE6 501 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 ZNF529Q6P280 563 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 GADL1Q6ZQY3 521 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 GDF7Q7Z4P5 450 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 SRLQ86TD4 932 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 ZNF276Q8N554 614 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 ZGPATQ8N5A5 531 aaKnown RBP3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 RNF169Q8NCN4 708 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 GPR150Q8NGU9 434 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 STON2Q8WXE9 905 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 TMX3Q96JJ7 454 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 LRFN3Q9BTN0 628 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 MAF1Q9H063 256 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 BHMT2Q9H2M3 363 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 NRDE2Q9H7Z3 1164 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 KLHL11Q9NVR0 708 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 TRPM5Q9NZQ8 1165 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 PACSIN3Q9UKS6 424 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 POLHQ9Y253 713 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 PCDHA13Q9Y5I0 950 aa3.68□□□□□ -1.82
HMGB1P9-201ENST00000429856 DRGXA6NNA5 263 aa3.67□□□□□ -1.82
HMGB1P9-201ENST00000429856 LEFTY2O00292 366 aa3.67□□□□□ -1.82
HMGB1P9-201ENST00000429856 SLC16A6O15403 523 aa3.67□□□□□ -1.82
HMGB1P9-201ENST00000429856 NBNO60934 754 aa3.67□□□□□ -1.82
HMGB1P9-201ENST00000429856 FAM20BO75063 409 aa3.67□□□□□ -1.82
HMGB1P9-201ENST00000429856 HLA-DOAP06340 250 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms