RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CASP4P49662 377 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 MCCD1P59942 119 aaPredicted RBP18.84■□□□□ 0.61
CTSD-203ENST00000429746 UBE2HP62256 183 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 NFIL3Q16649 462 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 SLC8B1Q6J4K2 584 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 HS2ST1Q7LGA3 356 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 PPFIBP1Q86W92 1011 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 GLYCTKQ8IVS8 523 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 ZNF516Q92618 1163 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 KHSRPQ92945 711 aaKnown RBP eCLIP18.84■□□□□ 0.61
CTSD-203ENST00000429746 GSDMAQ96QA5 445 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 APOL5Q9BWW9 433 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 INTS13Q9NVM9 706 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 FBXW11Q9UKB1 542 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 DCXO43602 365 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 TRAPPC3O43617 180 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 VNN2O95498 520 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 SPATA31D3P0C874 917 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 MCM4P33991 863 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 CLDN10P78369 228 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 RAB33AQ14088 237 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 PSMD6Q15008 389 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 C1orf220Q5T0J3 134 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 SPATA31D4Q6ZUB0 917 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 PALB2Q86YC2 1186 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 RDH13Q8NBN7 331 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 ZNF707Q96C28 371 aaPredicted RBP18.83■□□□□ 0.6
CTSD-203ENST00000429746 RTP3Q9BQQ7 232 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 MTMR12Q9C0I1 747 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 ADAM7Q9H2U9 754 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 KIAA1586Q9HCI6 787 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 MAN1C1Q9NR34 630 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 DZANK1Q9NVP4 752 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 NUB1Q9Y5A7 615 aa18.83■□□□□ 0.6
CTSD-203ENST00000429746 TIMM13Q9Y5L4 95 aaPredicted RBP18.83■□□□□ 0.6
CTSD-203ENST00000429746 PRPF40AO75400 957 aaKnown RBP18.82■□□□□ 0.6
CTSD-203ENST00000429746 OAZ2O95190 189 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 GLUD1P00367 558 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 NR3C1P04150 777 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 CYP11A1P05108 521 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 OR1D2P34982 312 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 PRCPP42785 496 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 TFAMQ00059 246 aaKnown RBP18.82■□□□□ 0.6
CTSD-203ENST00000429746 CREMQ03060 361 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 ZNF658Q5TYW1 1059 aaPredicted RBP18.82■□□□□ 0.6
CTSD-203ENST00000429746 ANKS3Q6ZW76 656 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 LIMS2Q7Z4I7 341 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 CMASQ8NFW8 434 aaPredicted RBP18.82■□□□□ 0.6
CTSD-203ENST00000429746 GOLGA5Q8TBA6 731 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 SENP8Q96LD8 212 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 FBXL5Q9UKA1 691 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 MAN1B1Q9UKM7 699 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 CDY1Q9Y6F8 540 aa18.82■□□□□ 0.6
CTSD-203ENST00000429746 DOCK8Q8NF50 2099 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 WDR27A2RRH5 827 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 PRR33A8MZF0 331 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 RFPL2O75678 378 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 ABLIM3O94929 683 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 ITGB3P05106 788 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 WEE2P0C1S8 567 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 CD44P16070 742 aaKnown RBP18.81■□□□□ 0.6
CTSD-203ENST00000429746 POLR2BP30876 1174 aaKnown RBP18.81■□□□□ 0.6
CTSD-203ENST00000429746 PMS1P54277 932 aaKnown RBP18.81■□□□□ 0.6
CTSD-203ENST00000429746 ROR1Q01973 937 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 MYBPC2Q14324 1141 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 RARS2Q5T160 578 aaKnown RBP18.81■□□□□ 0.6
CTSD-203ENST00000429746 PDXDC1Q6P996 788 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 WDR49Q8IV35 697 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 ZC3H3Q8IXZ2 948 aaKnown RBP18.81■□□□□ 0.6
CTSD-203ENST00000429746 PARD3BQ8TEW8 1205 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 NOC3LQ8WTT2 800 aaKnown RBP18.81■□□□□ 0.6
CTSD-203ENST00000429746 HDAC7Q8WUI4 952 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 CGRRF1Q99675 332 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 PHF7Q9BWX1 381 aaPredicted RBP18.81■□□□□ 0.6
CTSD-203ENST00000429746 LMBRD1Q9NUN5 540 aa18.81■□□□□ 0.6
CTSD-203ENST00000429746 KINO60870 393 aaKnown RBP18.8■□□□□ 0.6
CTSD-203ENST00000429746 TYMPP19971 482 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 DLG4P78352 724 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 CBX2Q14781 532 aaPredicted RBP18.8■□□□□ 0.6
CTSD-203ENST00000429746 CENPPQ6IPU0 288 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 GPR149Q86SP6 731 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 ADSSL1Q8N142 457 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 KREMEN2Q8NCW0 462 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 RHOBTB2Q9BYZ6 727 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 POMKQ9H5K3 350 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 SFXN1Q9H9B4 322 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 C11orf16Q9NQ32 467 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 ITGA11Q9UKX5 1188 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 MYO10Q9HD67 2058 aa18.8■□□□□ 0.6
CTSD-203ENST00000429746 LRRIQ3A6PVS8 624 aaPredicted RBP18.79■□□□□ 0.6
CTSD-203ENST00000429746 LOC730098B7Z3J9 87 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 EXOC3O60645 756 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 AKAP3O75969 853 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 CST3P01034 146 aaPredicted RBP18.79■□□□□ 0.6
CTSD-203ENST00000429746 TAF6P49848 677 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 ITIH3Q06033 890 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 MORC3Q14149 939 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 TMC5Q6UXY8 1006 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 TRAPPC11Q7Z392 1133 aa18.79■□□□□ 0.6
CTSD-203ENST00000429746 LRRC52Q8N7C0 313 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms