RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.52
LINC00887-203ENST00000429578 CXXC1Q9P0U4 656 aaPredicted RBP18.33■□□□□ 0.52
LINC00887-203ENST00000429578 CAPN11Q9UMQ6 739 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 NUB1Q9Y5A7 615 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 FHOD1Q9Y613 1164 aa18.33■□□□□ 0.52
LINC00887-203ENST00000429578 CASTOR2A6NHX0 329 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 GOLGA6L6A8MZA4 724 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 CLSTN1O94985 981 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 GCNT1Q02742 428 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 WDR72Q3MJ13 1102 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 ZNF667Q5HYK9 610 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 IQCEQ6IPM2 695 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 TMCO2Q7Z6W1 182 aaPredicted RBP18.32■□□□□ 0.52
LINC00887-203ENST00000429578 COLGALT2Q8IYK4 626 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 LRRC43Q8N309 656 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 CPLX3Q8WVH0 158 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 RC3H2Q9HBD1 1191 aaKnown RBP18.32■□□□□ 0.52
LINC00887-203ENST00000429578 UBE2TQ9NPD8 197 aaPredicted RBP18.32■□□□□ 0.52
LINC00887-203ENST00000429578 NLRC4Q9NPP4 1024 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 DNAJC12Q9UKB3 198 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 STXBP5LQ9Y2K9 1186 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 NLRC5Q86WI3 1866 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 RNF225M0QZC1 329 aaPredicted RBP18.32■□□□□ 0.52
LINC00887-203ENST00000429578 PODXLO00592 558 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 B4GALT3O60512 393 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 TAF6P49848 677 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 FAM117BQ6P1L5 589 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 RRAGAQ7L523 313 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 SLC9A7Q96T83 725 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 PAAF1Q9BRP4 392 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 NIF3L1Q9GZT8 377 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 CACNG4Q9UBN1 327 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 LUC7L2Q9Y383 392 aaKnown RBP18.32■□□□□ 0.52
LINC00887-203ENST00000429578 SLC4A7Q9Y6M7 1214 aa18.32■□□□□ 0.52
LINC00887-203ENST00000429578 TSC2P49815 1807 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 GJB5O95377 273 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 TBXAS1P24557 533 aaPredicted RBP18.31■□□□□ 0.52
LINC00887-203ENST00000429578 MFAP3P55082 362 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 LILRA4P59901 499 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 SV2CQ496J9 727 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 RASIP1Q5U651 963 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 ENOSF1Q7L5Y1 443 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 ZNF397Q8NF99 534 aaPredicted RBP18.31■□□□□ 0.52
LINC00887-203ENST00000429578 PHOSPHO2Q8TCD6 241 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 BAP1Q92560 729 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 STK33Q9BYT3 514 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 NRDE2Q9H7Z3 1164 aa18.31■□□□□ 0.52
LINC00887-203ENST00000429578 AJAP1Q9UKB5 411 aaPredicted RBP18.31■□□□□ 0.52
LINC00887-203ENST00000429578 KPNA7A9QM74 516 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 P4HA1P13674 534 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 ZBED6P86452 979 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 CUL2Q13617 745 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 RAPGEF1Q13905 1077 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 PAN2Q504Q3 1202 aaKnown RBP18.3■□□□□ 0.52
LINC00887-203ENST00000429578 CNGA4Q8IV77 575 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 CMTR2Q8IYT2 770 aaKnown RBP18.3■□□□□ 0.52
LINC00887-203ENST00000429578 JAKMIP2Q96AA8 810 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 KREMEN1Q96MU8 473 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 NXF1Q9UBU9 619 aaKnown RBP18.3■□□□□ 0.52
LINC00887-203ENST00000429578 DNAJB4Q9UDY4 337 aa18.3■□□□□ 0.52
LINC00887-203ENST00000429578 VWA8A3KMH1 1905 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 AKR1B15C9JRZ8 316 aaPredicted RBP18.29■□□□□ 0.52
LINC00887-203ENST00000429578 MFAP3LO75121 409 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 B3GAT3O94766 335 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 PAX3P23760 479 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 KRT9P35527 623 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 ASPAP45381 313 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 ADKP55263 362 aaKnown RBP18.29■□□□□ 0.52
LINC00887-203ENST00000429578 JAM2P57087 298 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 GSDMDP57764 484 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 C3orf58Q8NDZ4 430 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 KAT5Q92993 513 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 GUCD1Q96NT3 240 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 SPAG5Q96R06 1193 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 YME1L1Q96TA2 773 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 ARID3AQ99856 593 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 TMEM175Q9BSA9 504 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 BCO2Q9BYV7 579 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 GDAP2Q9NXN4 497 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 MYO6Q9UM54 1294 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 SPTLC1O15269 473 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 OR1G1P47890 313 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 TNNC1P63316 161 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 HTRA4P83105 476 aaPredicted RBP18.29■□□□□ 0.52
LINC00887-203ENST00000429578 DRAP1Q14919 205 aaPredicted RBP18.29■□□□□ 0.52
LINC00887-203ENST00000429578 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 CCDC186Q7Z3E2 898 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 TC2NQ8N9U0 490 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 RABGGTAQ92696 567 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 GPR88Q9GZN0 384 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 NUCKS1Q9H1E3 243 aaKnown RBP18.29■□□□□ 0.52
LINC00887-203ENST00000429578 HCSTQ9UBK5 93 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 POLIQ9UNA4 740 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 SNX9Q9Y5X1 595 aa18.29■□□□□ 0.52
LINC00887-203ENST00000429578 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.28■□□□□ 0.52
LINC00887-203ENST00000429578 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.28■□□□□ 0.52
LINC00887-203ENST00000429578 LRRC53A6NM62 1247 aa18.28■□□□□ 0.52
LINC00887-203ENST00000429578 F8VZ95 297 aa18.28■□□□□ 0.52
LINC00887-203ENST00000429578 TMEM189-UBE2V1I3L0A0 370 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms