RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CREB1P16220 341 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 PGM1P36871 562 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 MTIF2P46199 727 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 STT3AP46977 705 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC18A1P54219 525 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 POLR2FP61218 127 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 IRX4P78413 519 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 DR1Q01658 176 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 DLG1Q12959 904 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 TCIRG1Q13488 830 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CLUL1Q15846 466 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CRY1Q16526 586 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC18A3Q16572 532 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 C15orf59Q2T9L4 293 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 SFT2D3Q587I9 215 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ELMOD1Q8N336 334 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 LRRC57Q8N9N7 239 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 U2AF1L4Q8WU68 220 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ATL1Q8WXF7 558 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 PIGBQ92521 554 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 DPF3Q92784 378 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CNOT6LQ96LI5 555 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CCDC138Q96M89 665 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC4A9Q96Q91 983 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRIM51Q9BSJ1 452 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 IMPG2Q9BZV3 1241 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 GRIP2Q9C0E4 1043 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 KLC2Q9H0B6 622 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF304Q9HCX3 659 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 GNPTGQ9UJJ9 305 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 DIS3Q9Y2L1 958 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 MYH11P35749 1972 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ANKRD36CQ5JPF3 1778 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 LRP6O75581 1613 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 PVALEFA0A1B0GWK0 134 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 BICDL2A1A5D9 508 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 H3BSA7 217 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 FOXP2O15409 715 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 DNAJC6O75061 913 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 CIB2O75838 187 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 S100BP04271 92 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 TCEA1P23193 301 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 BTBD8Q5XKL5 378 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 FAM91A1Q658Y4 838 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 DHDDSQ86SQ9 333 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 MTDHQ86UE4 582 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF598Q86UK7 904 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 DNAJC10Q8IXB1 793 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 PHKBQ93100 1093 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 PLEKHA8Q96JA3 519 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 Q9H521 79 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 C10orf88Q9H8K7 445 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 C12orf10Q9HB07 376 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 MLXIPLQ9NP71 852 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 TYW1Q9NV66 732 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 DNAJC16Q9Y2G8 782 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 ABCB11O95342 1321 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 CDK2AP1O14519 115 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 RGS13O14921 159 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 SULT1C4O75897 302 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 RSL1D1O76021 490 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 ABCB1P08183 1280 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 KRT2P35908 639 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 PPP1R2P41236 205 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 KRT6CP48668 564 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 PPP2R5BQ15173 497 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 TMEM266Q2M3C6 531 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 DCAF6Q58WW2 860 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 RALYLQ86SE5 291 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 ANKRD35Q8N283 1001 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 SRBD1Q8N5C6 995 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 TTC1Q99614 292 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 SPZ1Q9BXG8 430 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRIM31Q9BZY9 425 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 MAN1C1Q9NR34 630 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 GRHL1Q9NZI5 618 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 NCKIPSDQ9NZQ3 722 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 PPP1R1BQ9UD71 204 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 LGALS13Q9UHV8 139 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 ARIH1Q9Y4X5 557 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC12A7Q9Y666 1083 aa9.34□□□□□ -0.91
CDC42BPA-206ENST00000429440 RIC1Q4ADV7 1423 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PFASO15067 1338 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 MAST3O60307 1309 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PDE8AO60658 829 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 CSDE1O75534 798 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 BAG2O95816 211 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 C21orf59P57076 290 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 SSRP1Q08945 709 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 PRKG1Q13976 671 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 USP43Q70EL4 1123 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLFN11Q7Z7L1 901 aa9.33□□□□□ -0.92
CDC42BPA-206ENST00000429440 OSTM1Q86WC4 334 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms