RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 UPP1Q16831 310 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 ARHGAP44Q17R89 818 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 PHLDB3Q6NSJ2 640 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 DSTYKQ6XUX3 929 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 ENOSF1Q7L5Y1 443 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 C3orf58Q8NDZ4 430 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZNF397Q8NF99 534 aaPredicted RBP8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 CXorf38Q8TB03 319 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 PHOSPHO2Q8TCD6 241 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 CPLX3Q8WVH0 158 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 KAT5Q92993 513 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 IQCDQ96DY2 449 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZNF558Q96NG5 402 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 ARID3AQ99856 593 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 PAAF1Q9BRP4 392 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 SMYD3Q9H7B4 428 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 NRDE2Q9H7Z3 1164 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 DNAJC12Q9UKB3 198 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 AJAP1Q9UKB5 411 aaPredicted RBP8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 SNX9Q9Y5X1 595 aa8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 MRPL42Q9Y6G3 142 aaKnown RBP8.49□□□□□ -1.05
HMGA1P4-201ENST00000428643 A0A1W2PQJ5 194 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 KPNA7A9QM74 516 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 AKR1B15C9JRZ8 316 aaPredicted RBP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 F8VZ95 297 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 F8W810 466 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 I3L4J1 428 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 SPTLC1O15269 473 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 HUS1O60921 280 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 TADA2AO75478 443 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 NOL4O94818 638 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 STAU1O95793 577 aaKnown RBP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 WEE2P0C1S8 567 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 LAG3P18627 525 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 CASP14P31944 242 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 ASPAP45381 313 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 RAP1GAPP47736 663 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 ALDH7A1P49419 539 aaKnown RBP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 FXR1P51114 621 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 BCAR1P56945 870 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 LILRA4P59901 499 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 YWHAEP62258 255 aaKnown RBP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 GCNT1Q02742 428 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 FIGNQ5HY92 759 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 RASIP1Q5U651 963 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 DCLRE1AQ6PJP8 1040 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 CNGA4Q8IV77 575 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 FIBCD1Q8N539 461 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 TATDN2Q93075 761 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZNF689Q96CS4 500 aaPredicted RBP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 FAM81BQ96LP2 452 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 KREMEN1Q96MU8 473 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 RAD9AQ99638 391 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 TMEM175Q9BSA9 504 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 COLEC11Q9BWP8 271 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 TTYH3Q9C0H2 523 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 VRTNQ9H8Y1 702 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 RC3H2Q9HBD1 1191 aaKnown RBP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 AAASQ9NRG9 546 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 IMPACTQ9P2X3 320 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 FBXL5Q9UKA1 691 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 FAN1Q9Y2M0 1017 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 LUC7L2Q9Y383 392 aaKnown RBP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 DAAM1Q9Y4D1 1078 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 INSL6Q9Y581 213 aa8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 SF3B1O75533 1304 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGA1P4-201ENST00000428643 TET1Q8NFU7 2136 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ARHGEF37A1IGU5 675 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 LRRC53A6NM62 1247 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 GRXCR1A8MXD5 290 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 NT5C1B-RDH14C9J2C7 533 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 TMEM189-UBE2V1I3L0A0 370 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 CYB561D2O14569 222 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 NRP1O14786 923 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 TRAPPC3O43617 180 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 MFAP3LO75121 409 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ALDH2P05091 517 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ITGB1P05556 798 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 GALTP07902 379 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 PNMA6AP0CW24 399 aaPredicted RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ODC1P11926 461 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 PAX3P23760 479 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 IGFBP6P24592 240 aaPredicted RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 KRT9P35527 623 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 PPM1AP35813 382 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 STAT1P42224 750 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 BRCC3P46736 316 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 RABGGTBP53611 331 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ADKP55263 362 aaKnown RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 GSDMDP57764 484 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 HTRA4P83105 476 aaPredicted RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ZBED6P86452 979 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ARID5AQ03989 594 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 GOLGA8FQ08AF8 430 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 GOLGA8DPQ0D2H9 430 aa8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 TBX2Q13207 712 aaPredicted RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 DRAP1Q14919 205 aaPredicted RBP8.47□□□□□ -1.05
HMGA1P4-201ENST00000428643 ASIC2Q16515 512 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms