RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 APPL2Q8NEU8 664 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 GDE1Q9NZC3 331 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 AFF4Q9UHB7 1163 aaKnown RBP16.89■□□□□ 0.29
SEC13-210ENST00000428626 CPSF3Q9UKF6 684 aaKnown RBP16.89■□□□□ 0.29
SEC13-210ENST00000428626 UBQLN1Q9UMX0 589 aaKnown RBP16.89■□□□□ 0.29
SEC13-210ENST00000428626 DCHS1Q96JQ0 3298 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 TSC2P49815 1807 aa16.89■□□□□ 0.29
SEC13-210ENST00000428626 COL4A2P08572 1712 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 KANSL1LA0AUZ9 987 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 H0YCG3 227 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 NFICP08651 508 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 CYP3A5P20815 502 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 GTF2BQ00403 316 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 PPP2R3AQ06190 1150 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 TWF1Q12792 350 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 FAM78AQ5JUQ0 283 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 C1orf210Q8IVY1 113 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 LARP4BQ92615 738 aaKnown RBP16.88■□□□□ 0.29
SEC13-210ENST00000428626 PGLYRP2Q96PD5 576 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 TMEM209Q96SK2 561 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 CCSER1Q9C0I3 900 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 DNAJC25Q9H1X3 360 aa16.88■□□□□ 0.29
SEC13-210ENST00000428626 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
SEC13-210ENST00000428626 PATJQ8NI35 1801 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 VPS37CA5D8V6 355 aaPredicted RBP16.87■□□□□ 0.29
SEC13-210ENST00000428626 SP9P0CG40 484 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 CPB1P15086 417 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 MARCKSP29966 332 aaPredicted RBP16.87■□□□□ 0.29
SEC13-210ENST00000428626 PRKCQQ04759 706 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 YWHAHQ04917 246 aaPredicted RBP16.87■□□□□ 0.29
SEC13-210ENST00000428626 GRM2Q14416 872 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 SPATA1Q5VX52 437 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 ADSSL1Q8N142 457 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 TTC9BQ8N6N2 239 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 MSTO1Q9BUK6 570 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 LRRC3Q9BY71 257 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 ZHX3Q9H4I2 956 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 RPF1Q9H9Y2 349 aaKnown RBP16.87■□□□□ 0.29
SEC13-210ENST00000428626 HEBP1Q9NRV9 189 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 FBXO2Q9UK22 296 aaPredicted RBP16.87■□□□□ 0.29
SEC13-210ENST00000428626 YIPF1Q9Y548 306 aa16.87■□□□□ 0.29
SEC13-210ENST00000428626 FRYLO94915 3013 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 BMP15O95972 392 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 TARSP26639 723 aaKnown RBP16.86■□□□□ 0.29
SEC13-210ENST00000428626 DDIT3P35638 169 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 ACOT2P49753 483 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 CDR1P51861 262 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 EPHA5P54756 1037 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 LILRA4P59901 499 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 RESTQ13127 1097 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 FZD5Q13467 585 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 UBXN2BQ14CS0 331 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 TPRG1Q6ZUI0 275 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 PDZD4Q76G19 769 aaPredicted RBP16.86■□□□□ 0.29
SEC13-210ENST00000428626 ELSPBP1Q96BH3 223 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 SHDQ96IW2 340 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 ASB16Q96NS5 453 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 CLIC6Q96NY7 704 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 LTB4R2Q9NPC1 389 aa16.86■□□□□ 0.29
SEC13-210ENST00000428626 FAM170BA6NMN3 283 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 TBCAO75347 108 aaKnown RBP16.85■□□□□ 0.29
SEC13-210ENST00000428626 PPP1R37O75864 691 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 MICAL2O94851 1124 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 KRT18P05783 430 aaKnown RBP16.85■□□□□ 0.29
SEC13-210ENST00000428626 MYL4P12829 197 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 VIPR2P41587 438 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 WNT7BP56706 349 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 PFKPQ01813 784 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 KCNA1Q09470 495 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 DUSP4Q13115 394 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 C9orf57Q5W0N0 161 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 CRELD2Q6UXH1 353 aaPredicted RBP16.85■□□□□ 0.29
SEC13-210ENST00000428626 DSTYKQ6XUX3 929 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 SFR1Q86XK3 245 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 TMC8Q8IU68 726 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 ZNF687Q8N1G0 1237 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 ATAD1Q8NBU5 361 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 ZSWIM2Q8NEG5 633 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 RASSF8Q8NHQ8 419 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 SHKBP1Q8TBC3 707 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 RSPRY1Q96DX4 576 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 SENP8Q96LD8 212 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 ZNF512Q96ME7 567 aaPredicted RBP16.85■□□□□ 0.29
SEC13-210ENST00000428626 SLC27A5Q9Y2P5 690 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 STYXL1Q9Y6J8 313 aa16.85■□□□□ 0.29
SEC13-210ENST00000428626 ANO9A1A5B4 782 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 MTMR11A4FU01 709 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 MYMKA6NI61 221 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 PIRO00625 290 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 SOAT2O75908 522 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 TYMPP19971 482 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 ADSSP30520 456 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 GPR17Q13304 367 aa16.84■□□□□ 0.29
SEC13-210ENST00000428626 TEAD2Q15562 447 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms