RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TPD52L1Q16890 204 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-209ENST00000425836 TCEAL5Q5H9L2 206 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 DSTYKQ6XUX3 929 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 ADGRD2Q7Z7M1 963 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 IRF2BP1Q8IU81 584 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 MICALL1Q8N3F8 863 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 ENOX1Q8TC92 643 aaKnown RBP26.37■■□□□ 1.81
VEGFA-209ENST00000425836 RIN2Q8WYP3 895 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-209ENST00000425836 PCDHB8Q9UN66 801 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 R3HCC1Q9Y3T6 440 aaKnown RBP26.37■■□□□ 1.81
VEGFA-209ENST00000425836 TRANK1O15050 2925 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-209ENST00000425836 KPNA7A9QM74 516 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 CCDC192P0DO97 292 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 GTF2H1P32780 548 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 CA8P35219 290 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 MARSP56192 900 aaKnown RBP26.37■■□□□ 1.81
VEGFA-209ENST00000425836 ZSCAN23Q3MJ62 389 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 SV2CQ496J9 727 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 DCAF17Q5H9S7 520 aaPredicted RBP26.37■■□□□ 1.81
VEGFA-209ENST00000425836 TCERG1LQ5VWI1 586 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 GPR65Q8IYL9 337 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 SLC35C1Q96A29 364 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 HPDLQ96IR7 371 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 SENP8Q96LD8 212 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 MMRN2Q9H8L6 949 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 SSX2IPQ9Y2D8 614 aa26.37■■□□□ 1.81
VEGFA-209ENST00000425836 SYN3O14994 580 aa26.36■■□□□ 1.81
VEGFA-209ENST00000425836 VNN1O95497 513 aa26.36■■□□□ 1.81
VEGFA-209ENST00000425836 TRPC3Q13507 836 aa26.36■■□□□ 1.81
VEGFA-209ENST00000425836 PRSS55Q6UWB4 352 aaPredicted RBP26.36■■□□□ 1.81
VEGFA-209ENST00000425836 LNX1Q8TBB1 728 aaPredicted RBP26.36■■□□□ 1.81
VEGFA-209ENST00000425836 PIK3R5Q8WYR1 880 aa26.36■■□□□ 1.81
VEGFA-209ENST00000425836 TMEM8AQ9HCN3 771 aa26.36■■□□□ 1.81
VEGFA-209ENST00000425836 MYO9BQ13459 2157 aa26.36■■□□□ 1.81
VEGFA-209ENST00000425836 STX10O60499 249 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 MYL6P60660 151 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 NCOA4Q13772 614 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 ANO6Q4KMQ2 910 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 TRIM59Q8IWR1 403 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 THAP9Q9H5L6 903 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 RXFP1Q9HBX9 757 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 STXBP5LQ9Y2K9 1186 aa26.35■■□□□ 1.81
VEGFA-209ENST00000425836 PER2O15055 1255 aa26.34■■□□□ 1.81
VEGFA-209ENST00000425836 MYO1EQ12965 1108 aa26.34■■□□□ 1.81
VEGFA-209ENST00000425836 CCDC85BQ15834 202 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-209ENST00000425836 RBM23Q86U06 439 aaKnown RBP26.34■■□□□ 1.81
VEGFA-209ENST00000425836 APPL2Q8NEU8 664 aa26.34■■□□□ 1.81
VEGFA-209ENST00000425836 CNOT6LQ96LI5 555 aaKnown RBP26.34■■□□□ 1.81
VEGFA-209ENST00000425836 XYLT2Q9H1B5 865 aa26.34■■□□□ 1.81
VEGFA-209ENST00000425836 NFE2L3Q9Y4A8 694 aa26.34■■□□□ 1.81
VEGFA-209ENST00000425836 TIMM13Q9Y5L4 95 aaPredicted RBP26.34■■□□□ 1.81
VEGFA-209ENST00000425836 CYB561D2O14569 222 aa26.33■■□□□ 1.81
VEGFA-209ENST00000425836 CNPP09543 421 aaKnown RBP26.33■■□□□ 1.81
VEGFA-209ENST00000425836 VARS2Q5ST30 1063 aaKnown RBP26.33■■□□□ 1.81
VEGFA-209ENST00000425836 KRT39Q6A163 491 aa26.33■■□□□ 1.81
VEGFA-209ENST00000425836 TLE6Q9H808 572 aa26.33■■□□□ 1.81
VEGFA-209ENST00000425836 GDAP2Q9NXN4 497 aa26.33■■□□□ 1.81
VEGFA-209ENST00000425836 STAU1O95793 577 aaKnown RBP26.33■■□□□ 1.8
VEGFA-209ENST00000425836 ODC1P11926 461 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 ATICP31939 592 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 NRIP1P48552 1158 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 HYAL1Q12794 435 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 MRPL58Q14197 206 aaKnown RBP26.33■■□□□ 1.8
VEGFA-209ENST00000425836 PSMD5Q16401 504 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 CBWD6Q4V339 395 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 CBWD3Q5JTY5 395 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 CBWD5Q5RIA9 395 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 PDXDC1Q6P996 788 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 CREBRFQ8IUR6 639 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 TAS1R2Q8TE23 839 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 PPP2R3CQ969Q6 453 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 KLHL5Q96PQ7 755 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 EMILIN2Q9BXX0 1053 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.33■■□□□ 1.8
VEGFA-209ENST00000425836 SAMSN1Q9NSI8 373 aaKnown RBP26.33■■□□□ 1.8
VEGFA-209ENST00000425836 SNX9Q9Y5X1 595 aa26.33■■□□□ 1.8
VEGFA-209ENST00000425836 HLA-DRAP01903 254 aa26.32■■□□□ 1.8
VEGFA-209ENST00000425836 RPL17P18621 184 aaKnown RBP26.32■■□□□ 1.8
VEGFA-209ENST00000425836 TYMPP19971 482 aa26.32■■□□□ 1.8
VEGFA-209ENST00000425836 GTF2F1P35269 517 aaKnown RBP eCLIP26.32■■□□□ 1.83e-11■■■■■ 42.3
VEGFA-209ENST00000425836 MXI1P50539 228 aa26.32■■□□□ 1.8
VEGFA-209ENST00000425836 DUSP6Q16828 381 aa26.32■■□□□ 1.8
VEGFA-209ENST00000425836 ANKS3Q6ZW76 656 aa26.32■■□□□ 1.8
VEGFA-209ENST00000425836 NAT10Q9H0A0 1025 aaKnown RBP26.32■■□□□ 1.8
VEGFA-209ENST00000425836 FNIP2Q9P278 1114 aa26.32■■□□□ 1.8
VEGFA-209ENST00000425836 TEX28O15482 410 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 CYP11A1P05108 521 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 HSP90AA4PQ58FG1 418 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 PPM1EQ8WY54 764 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 CLSTN3Q9BQT9 956 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 IGFLR1Q9H665 355 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 VRTNQ9H8Y1 702 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 MTRRQ9UBK8 725 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.31■■□□□ 1.81e-11■□□□□ 9.4
VEGFA-209ENST00000425836 BACE2Q9Y5Z0 518 aa26.31■■□□□ 1.8
VEGFA-209ENST00000425836 ARHGEF37A1IGU5 675 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 CLASP2O75122 1294 aaKnown RBP26.3■■□□□ 1.8
VEGFA-209ENST00000425836 OAZ2O95190 189 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 PIK3CAP42336 1068 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms