RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 DPH6Q7L8W6 267 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 LUZP1Q86V48 1076 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 CXorf38Q8TB03 319 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 HERC2P3Q9BVR0 1158 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 NDST4Q9H3R1 872 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 RAB20Q9NX57 234 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 GDAP2Q9NXN4 497 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 MTUS1Q9ULD2 1270 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 LAMA3Q16787 3333 aa25.91■■□□□ 1.74
APOE-202ENST00000425718 PES1O00541 588 aaKnown RBP25.9■■□□□ 1.74
APOE-202ENST00000425718 LPXNO60711 386 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 ARHGEF15O94989 841 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 ITGB1P05556 798 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 FAM163BP0C2L3 166 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 TNNC1P63316 161 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 HSP90AA4PQ58FG1 418 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 ZNF667Q5HYK9 610 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 FKBP15Q5T1M5 1219 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 FAM81BQ96LP2 452 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 OXCT2Q9BYC2 517 aaPredicted RBP25.9■■□□□ 1.74
APOE-202ENST00000425718 FAM124BQ9H5Z6 455 aaPredicted RBP25.9■■□□□ 1.74
APOE-202ENST00000425718 PCDHB8Q9UN66 801 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 VWA8A3KMH1 1905 aa25.9■■□□□ 1.74
APOE-202ENST00000425718 M0QZQ0 153 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 HUS1O60921 280 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 TYMPP19971 482 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 CBWD6Q4V339 395 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 CBWD3Q5JTY5 395 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 CBWD5Q5RIA9 395 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 KIAA1841Q6NSI8 718 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 GBP6Q6ZN66 633 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 METTL23Q86XA0 190 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 TMEM86AQ8N2M4 240 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 C3orf58Q8NDZ4 430 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 SPPL3Q8TCT6 385 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 NGRNQ9NPE2 291 aaKnown RBP25.89■■□□□ 1.74
APOE-202ENST00000425718 LMCD1Q9NZU5 365 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 CACNG4Q9UBN1 327 aa25.89■■□□□ 1.74
APOE-202ENST00000425718 COL4A4P53420 1690 aaPredicted RBP25.88■■□□□ 1.73
APOE-202ENST00000425718 VNN1O95497 513 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 ASS1P00966 412 aaKnown RBP25.88■■□□□ 1.73
APOE-202ENST00000425718 CST3P01034 146 aaPredicted RBP25.88■■□□□ 1.73
APOE-202ENST00000425718 URODP06132 367 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 MYL6P60660 151 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 FAM171A1Q5VUB5 890 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 RNF168Q8IYW5 571 aaPredicted RBP25.88■■□□□ 1.73
APOE-202ENST00000425718 TOP6BLQ8N6T0 577 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 TAS1R2Q8TE23 839 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 HASPINQ8TF76 798 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 POF1BQ8WVV4 589 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 SENP8Q96LD8 212 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 TTPALQ9BTX7 342 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 DNAI2Q9GZS0 605 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 HSD3B7Q9H2F3 369 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 TLR9Q9NR96 1032 aa25.88■■□□□ 1.73
APOE-202ENST00000425718 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.88■■□□□ 1.733e-8■■□□□ 12.8
APOE-202ENST00000425718 EFEMP2O95967 443 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 TPM3P06753 285 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 GLUD2P49448 558 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 COPB1P53618 953 aaKnown RBP25.87■■□□□ 1.73
APOE-202ENST00000425718 EXOC3L4Q17RC7 722 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 TIGD5Q53EQ6 642 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 SMYD5Q6GMV2 418 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 ANKS3Q6ZW76 656 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 TMEM173Q86WV6 379 aaPredicted RBP25.87■■□□□ 1.73
APOE-202ENST00000425718 VPS52Q8N1B4 723 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 TTC39CQ8N584 583 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 RABGGTAQ92696 567 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 PPP2R3CQ969Q6 453 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 TAB2Q9NYJ8 693 aa25.87■■□□□ 1.73
APOE-202ENST00000425718 H7C4K7 107 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 CYB561D2O14569 222 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 PPEF2O14830 753 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 SERPINC1P01008 464 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 CTSAP10619 480 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 FGFR3P22607 806 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 NOP14P78316 857 aaKnown RBP25.86■■□□□ 1.73
APOE-202ENST00000425718 SMC1AQ14683 1233 aaKnown RBP25.86■■□□□ 1.73
APOE-202ENST00000425718 WDR72Q3MJ13 1102 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 MIIPQ5JXC2 388 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 CD300LGQ6UXG3 332 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 BCL7CQ8WUZ0 217 aaPredicted RBP25.86■■□□□ 1.73
APOE-202ENST00000425718 GPR62Q9BZJ7 368 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 ZBP1Q9H171 429 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 XYLT2Q9H1B5 865 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 VPS16Q9H269 839 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 CERS4Q9HA82 394 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 ENTPD7Q9NQZ7 604 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 MRPL17Q9NRX2 175 aaKnown RBP25.86■■□□□ 1.73
APOE-202ENST00000425718 SNX9Q9Y5X1 595 aa25.86■■□□□ 1.73
APOE-202ENST00000425718 FSD2A1L4K1 749 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 LGALS16A8MUM7 142 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 SOX1O00570 391 aaPredicted RBP25.85■■□□□ 1.73
APOE-202ENST00000425718 CYP11A1P05108 521 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 TRIM21P19474 475 aaKnown RBP25.85■■□□□ 1.73
APOE-202ENST00000425718 TBXAS1P24557 533 aaPredicted RBP25.85■■□□□ 1.73
APOE-202ENST00000425718 BRCC3P46736 316 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 YWHAEP62258 255 aaKnown RBP25.85■■□□□ 1.73
APOE-202ENST00000425718 DSG1Q02413 1049 aa25.85■■□□□ 1.73
APOE-202ENST00000425718 TMC7Q7Z402 723 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms