RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 COMMD8Q9NX08 183 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 GGA3Q9NZ52 723 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 RBPJLQ9UBG7 517 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 GRHPRQ9UBQ7 328 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 FTSJ1Q9UET6 329 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 TBK1Q9UHD2 729 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 VPS28Q9UK41 221 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 DENND2AQ9ULE3 1009 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 AGTPBP1Q9UPW5 1226 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 WASF3Q9UPY6 502 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 PCDHGB2Q9Y5G2 931 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 PCDHA9Q9Y5H5 950 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SNX13Q9Y5W8 968 aa4.15□□□□□ -1.75
SF3B1-205ENST00000424674 SOS1Q07889 1333 aaPredicted RBP4.15□□□□□ -1.75
SF3B1-205ENST00000424674 GOLGA6L3A6NEY3 463 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 TRAF5O00463 557 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 NKRFO15226 690 aaKnown RBP eCLIP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 DAPK3O43293 454 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 TBCAO75347 108 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 H2AFYO75367 372 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 B3GALNT1O75752 331 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 FGF18O76093 207 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 CCDC159P0C7I6 412 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 THEGLP0DJG4 465 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 GNAT1P11488 350 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 ATP1A3P13637 1013 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF20P17024 532 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 KCNA6P17658 529 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 ATP5DP30049 168 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 PDIA3P30101 505 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 MC4RP32245 332 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 GPR3P46089 330 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 AGFG1P52594 562 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 UBASH3AP57075 661 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 UBXN1Q04323 297 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 SPIRE1Q08AE8 756 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 TRPC3Q13507 836 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 SLMAPQ14BN4 828 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 TNIP1Q15025 636 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 E2F5Q15329 346 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 ABHD17CQ6PCB6 329 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 UNC5DQ6UXZ4 953 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 RAPH1Q70E73 1250 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 USP45Q70EL2 814 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 CCDC91Q7Z6B0 441 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 HEATR4Q86WZ0 1026 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 ZC3H7AQ8IWR0 971 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 RTKN2Q8IZC4 609 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 CARNMT1Q8N4J0 409 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 KLHL36Q8N4N3 616 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 ANKRD52Q8NB46 1076 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 CHST13Q8NET6 341 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 UHMK1Q8TAS1 419 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 SPATA18Q8TC71 538 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 LMBR1Q8WVP7 490 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 RFFLQ8WZ73 363 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 RUBCNQ92622 972 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 JAKMIP1Q96N16 626 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 PYM1Q9BRP8 204 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 C1QTNF3Q9BXJ4 246 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 TOMM22Q9NS69 142 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 DACT1Q9NYF0 836 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 CPSF2Q9P2I0 782 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 C19orf53Q9UNZ5 99 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 CORO2BQ9UQ03 480 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 RRP15Q9Y3B9 282 aaKnown RBP4.14□□□□□ -1.75
SF3B1-205ENST00000424674 CEP83Q9Y592 693 aa4.14□□□□□ -1.75
SF3B1-205ENST00000424674 A0A1W2PPH5 198 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 C1QTNF3-AMACRE9PGA6 284 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 RTCAO00442 366 aaKnown RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 KCNK3O14649 394 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 MYF5P13349 255 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ALOX15P16050 662 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 HTR1BP28222 390 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 LSP1P33241 339 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ABCD1P33897 745 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ALDH9A1P49189 494 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 EVCP57679 992 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 GPR85P60893 370 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ARF3P61204 181 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 VAMP2P63027 116 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 UBXN2AP68543 259 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 PHC1P78364 1004 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 HMGN5P82970 282 aaKnown RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ARF1P84077 181 aaKnown RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ZNF543Q08ER8 600 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TUSC3Q13454 348 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 KRT32Q14532 448 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TAF5Q15542 800 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TAF7Q15545 349 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-205ENST00000424674 PGS1Q32NB8 556 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 C5orf22Q49AR2 442 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 TMEM177Q53S58 311 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 HSP90B2PQ58FF3 399 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 HSP90AB3PQ58FF7 597 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 CNSTQ6PJW8 725 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 LMBR1LQ6UX01 489 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 ARHGEF18Q6ZSZ5 1173 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 USP51Q70EK9 711 aa4.13□□□□□ -1.75
SF3B1-205ENST00000424674 MAEAQ7L5Y9 396 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms