RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DCAF17Q5H9S7 520 aaPredicted RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 TDRD10Q5VZ19 366 aaKnown RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 SV2AQ7L0J3 742 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 FRMD5Q7Z6J6 570 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 USP37Q86T82 979 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 CEP57Q86XR8 500 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 RNF168Q8IYW5 571 aaPredicted RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 ENOX1Q8TC92 643 aaKnown RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 AUTS2Q8WXX7 1259 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 FUCA2Q9BTY2 467 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 LMAN2LQ9H0V9 348 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 EPHX3Q9H6B9 360 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 METTL14Q9HCE5 456 aaKnown RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 ENTPD7Q9NQZ7 604 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 R3HCC1Q9Y3T6 440 aaKnown RBP10□□□□□ -0.81
PDGFC-202ENST00000422544 MTCH2Q9Y6C9 303 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 VPS13AQ96RL7 3174 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 SF3B1O75533 1304 aaKnown RBP eCLIP10□□□□□ -0.81
PDGFC-202ENST00000422544 SPTBN4Q9H254 2564 aa10□□□□□ -0.81
PDGFC-202ENST00000422544 ATG2AQ2TAZ0 1938 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 C2CD2LO14523 706 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 FSCN2O14926 492 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 TRAPPC3O43617 180 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 GNA14O95837 355 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 CTSAP10619 480 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 POU3F3P20264 500 aaPredicted RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 GTF2H1P32780 548 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 CA8P35219 290 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 TAF6P49848 677 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 MYL6P60660 151 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 ENPEPQ07075 957 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 ELAVL2Q12926 359 aaKnown RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 TRPC3Q13507 836 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 USP41Q3LFD5 358 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 HSP90AA4PQ58FG1 418 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 RTP2Q5QGT7 225 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 TCERG1LQ5VWI1 586 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 PLPP4Q5VZY2 271 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 KIAA1841Q6NSI8 718 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 DSTYKQ6XUX3 929 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 C15orf39Q6ZRI6 1047 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 IRF2BP1Q8IU81 584 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 MICALL1Q8N3F8 863 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 MRPL43Q8N983 215 aaKnown RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 ATXN2LQ8WWM7 1075 aaKnown RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 PPM1EQ8WY54 764 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 ELMO3Q96BJ8 720 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 FAM122AQ96E09 287 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 SENP8Q96LD8 212 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 UHRF1Q96T88 793 aaPredicted RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 LRFN3Q9BTN0 628 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 HERC2P3Q9BVR0 1158 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 ZBP1Q9H171 429 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 THAP9Q9H5L6 903 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 NGRNQ9NPE2 291 aaKnown RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 CHST7Q9NS84 486 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 SAMSN1Q9NSI8 373 aaKnown RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 LMCD1Q9NZU5 365 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 STK39Q9UEW8 545 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 NFE2L3Q9Y4A8 694 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 TIMM13Q9Y5L4 95 aaPredicted RBP9.99□□□□□ -0.81
PDGFC-202ENST00000422544 MYO7AQ13402 2215 aa9.99□□□□□ -0.81
PDGFC-202ENST00000422544 TRIP11Q15643 1979 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 C2orf71A6NGG8 1288 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 HIDE1A8MVS5 230 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 KPNA7A9QM74 516 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 M0QZQ0 153 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 CYB561D2O14569 222 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 PER2O15055 1255 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 STX10O60499 249 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 LILRB3O75022 631 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 VNN1O95497 513 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 URODP06132 367 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 FGFR3P22607 806 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 TKTP29401 623 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 PNPLA4P41247 253 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 GLUD2P49448 558 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 AARSP49588 968 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 MARSP56192 900 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 DSG1Q02413 1049 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 TFF2Q03403 129 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 NCOA4Q13772 614 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 SMC1AQ14683 1233 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 BMS1Q14692 1282 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 PTPN14Q15678 1187 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 ZACNQ401N2 412 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 SV2CQ496J9 727 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 KIAA0319Q5VV43 1072 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 PDE12Q6L8Q7 609 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 PRSS55Q6UWB4 352 aaPredicted RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 ADGRD2Q7Z7M1 963 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 RBM23Q86U06 439 aaKnown RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 TRIM59Q8IWR1 403 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 LRRC52Q8N7C0 313 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 RIN2Q8WYP3 895 aaPredicted RBP9.98□□□□□ -0.81
PDGFC-202ENST00000422544 SLC35C1Q96A29 364 aa9.98□□□□□ -0.81
PDGFC-202ENST00000422544 CNOT6LQ96LI5 555 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms