RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CCDC47Q96A33 483 aaKnown RBP28.56■■■□□ 2.16
CDK9-202ENST00000421939 ZNF707Q96C28 371 aaPredicted RBP28.56■■■□□ 2.16
CDK9-202ENST00000421939 CCDC34Q96HJ3 373 aa28.56■■■□□ 2.16
CDK9-202ENST00000421939 KIAA1586Q9HCI6 787 aa28.56■■■□□ 2.16
CDK9-202ENST00000421939 CGNQ9P2M7 1197 aaKnown RBP28.56■■■□□ 2.16
CDK9-202ENST00000421939 FBXL5Q9UKA1 691 aa28.56■■■□□ 2.16
CDK9-202ENST00000421939 C8AP07357 584 aa28.55■■■□□ 2.16
CDK9-202ENST00000421939 CYP2J2P51589 502 aa28.55■■■□□ 2.16
CDK9-202ENST00000421939 ROR1Q01973 937 aa28.55■■■□□ 2.16
CDK9-202ENST00000421939 DPYDQ12882 1025 aa28.55■■■□□ 2.16
CDK9-202ENST00000421939 CCDC149Q6ZUS6 474 aa28.55■■■□□ 2.16
CDK9-202ENST00000421939 RNF135Q8IUD6 432 aa28.55■■■□□ 2.16
CDK9-202ENST00000421939 SMG7Q92540 1137 aaKnown RBP28.55■■■□□ 2.16
CDK9-202ENST00000421939 PDE11AQ9HCR9 933 aa28.55■■■□□ 2.16
CDK9-202ENST00000421939 CLIC2O15247 247 aa28.54■■■□□ 2.16
CDK9-202ENST00000421939 SPTLC1O15269 473 aa28.54■■■□□ 2.16
CDK9-202ENST00000421939 ODC1P11926 461 aa28.54■■■□□ 2.16
CDK9-202ENST00000421939 ANP32AP39687 249 aaKnown RBP28.54■■■□□ 2.16
CDK9-202ENST00000421939 YWHAHQ04917 246 aaPredicted RBP28.54■■■□□ 2.16
CDK9-202ENST00000421939 FMR1NBQ8N0W7 255 aaPredicted RBP28.54■■■□□ 2.16
CDK9-202ENST00000421939 GOLGA5Q8TBA6 731 aa28.54■■■□□ 2.16
CDK9-202ENST00000421939 CACTINQ8WUQ7 758 aaKnown RBP28.54■■■□□ 2.16
CDK9-202ENST00000421939 PRKD2Q9BZL6 878 aa28.54■■■□□ 2.16
CDK9-202ENST00000421939 TIMM13Q9Y5L4 95 aaPredicted RBP28.54■■■□□ 2.16
CDK9-202ENST00000421939 TAF6P49848 677 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 SNRNP35Q16560 246 aaKnown RBP28.53■■■□□ 2.16
CDK9-202ENST00000421939 USP37Q86T82 979 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 C12orf56Q8IXR9 622 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 C1orf127Q8N9H9 656 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 XXYLT1Q8NBI6 393 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 SLC7A14Q8TBB6 771 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 SENP8Q96LD8 212 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 ZNF560Q96MR9 790 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 SCN1AP35498 2009 aa28.53■■■□□ 2.16
CDK9-202ENST00000421939 ARHGEF37A1IGU5 675 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 WDR27A2RRH5 827 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 PI4K2BG5E9Z4 385 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 DCXO43602 365 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 RHOBTB3O94955 611 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 OAZ2O95190 189 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 HNRNPA1P09651 372 aaKnown RBP eCLIP28.52■■■□□ 2.16
CDK9-202ENST00000421939 TYMPP19971 482 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 HOXA9P31269 272 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 ARPP19P56211 112 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 SURF1Q15526 300 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 PPM1LQ5SGD2 360 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 TDRD5Q8NAT2 981 aaKnown RBP28.52■■■□□ 2.16
CDK9-202ENST00000421939 ZNF461Q8TAF7 563 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 EPHX3Q9H6B9 360 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 PIDD1Q9HB75 910 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 MUTYHQ9UIF7 546 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 USTQ9Y2C2 406 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 TSC2P49815 1807 aa28.52■■■□□ 2.16
CDK9-202ENST00000421939 CLUHO75153 1309 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 C2CD4DB7Z1M9 353 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 TMEM191BP0C7N4 346 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 ALADP13716 330 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 POLR2BP30876 1174 aaKnown RBP28.51■■■□□ 2.15
CDK9-202ENST00000421939 FAM160A1Q05DH4 1040 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 FAM84AQ96KN4 292 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 OXCT2Q9BYC2 517 aaPredicted RBP28.51■■■□□ 2.15
CDK9-202ENST00000421939 MTMR12Q9C0I1 747 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 WDR6Q9NNW5 1121 aaKnown RBP28.51■■■□□ 2.15
CDK9-202ENST00000421939 ITGA11Q9UKX5 1188 aa28.51■■■□□ 2.15
CDK9-202ENST00000421939 PTPRJQ12913 1337 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 ABLIM3O94929 683 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 ITGB3P05106 788 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 PNPLA4P41247 253 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 SNW1Q13573 536 aaKnown RBP28.5■■■□□ 2.15
CDK9-202ENST00000421939 KCNB1Q14721 858 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 UVSSAQ2YD98 709 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 SV2CQ496J9 727 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 TPGS2Q68CL5 300 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 OVOS1Q6IE37 1185 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 RTL10Q7L3V2 364 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 ENGASEQ8NFI3 743 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 INTS13Q9NVM9 706 aa28.5■■■□□ 2.15
CDK9-202ENST00000421939 OR6C75A6NL08 312 aa28.49■■■□□ 2.15
CDK9-202ENST00000421939 CPB1P15086 417 aa28.49■■■□□ 2.15
CDK9-202ENST00000421939 LMBRD2Q68DH5 695 aaPredicted RBP28.49■■■□□ 2.15
CDK9-202ENST00000421939 RDH13Q8NBN7 331 aa28.49■■■□□ 2.15
CDK9-202ENST00000421939 ANKRD36BP1Q96IX9 119 aa28.49■■■□□ 2.15
CDK9-202ENST00000421939 KCTD10Q9H3F6 313 aa28.49■■■□□ 2.15
CDK9-202ENST00000421939 DSEQ9UL01 958 aa28.49■■■□□ 2.15
CDK9-202ENST00000421939 AGAP1Q9UPQ3 857 aa28.49■■■□□ 2.15
CDK9-202ENST00000421939 CYB561D2O14569 222 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 CCL16O15467 120 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 EXOC3O60645 756 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 XYLBO75191 536 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 KIF20AO95235 890 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 CYP11A1P05108 521 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 POU2F2P09086 479 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 ATF2P15336 505 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 ELF1P32519 619 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 CYP24A1Q07973 514 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 PSMD6Q15008 389 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 OTOP3Q7RTS5 596 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 WDR49Q8IV35 697 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 CSGALNACT2Q8N6G5 542 aa28.48■■■□□ 2.15
CDK9-202ENST00000421939 LRRC52Q8N7C0 313 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms