RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ZNF75CPQ92670 426 aaPredicted RBP22.52■■□□□ 1.2
USP48-205ENST00000421625 FAM136AQ96C01 138 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 FAM84AQ96KN4 292 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 CADM1Q9BY67 442 aaKnown RBP22.52■■□□□ 1.2
USP48-205ENST00000421625 TLE6Q9H808 572 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 LARSQ9P2J5 1176 aaKnown RBP22.52■■□□□ 1.2
USP48-205ENST00000421625 DCTN4Q9UJW0 460 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 PRR12Q9ULL5 1215 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 ASB3Q9Y575 518 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 CD58P19256 250 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 RBBP5Q15291 538 aaKnown RBP22.52■■□□□ 1.2
USP48-205ENST00000421625 SGSM1Q2NKQ1 1148 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 RNF220Q5VTB9 566 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 LVRNQ6Q4G3 990 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 C12orf56Q8IXR9 622 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 FBXO41Q8TF61 875 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 MAK16Q9BXY0 300 aaKnown RBP22.52■■□□□ 1.2
USP48-205ENST00000421625 VPS37BQ9H9H4 285 aa22.52■■□□□ 1.2
USP48-205ENST00000421625 SMG5Q9UPR3 1016 aaKnown RBP22.52■■□□□ 1.2
USP48-205ENST00000421625 WDR91A4D1P6 747 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 ETS1P14921 441 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 RAB27AP51159 221 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 OVGP1Q12889 678 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 MAPK6Q16659 721 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 SLC45A4Q5BKX6 768 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 NRG4Q8WWG1 115 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 GMCL1Q96IK5 515 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 OSBPL8Q9BZF1 889 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 KLHL11Q9NVR0 708 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 KANSL3Q9P2N6 904 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 TYROBPO43914 113 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 JAG1P78504 1218 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 DOK7Q18PE1 504 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 CEP55Q53EZ4 464 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 CWF19L1Q69YN2 538 aaKnown RBP22.51■■□□□ 1.19
USP48-205ENST00000421625 KIFAP3Q92845 792 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 C2CD2Q9Y426 696 aa22.51■■□□□ 1.19
USP48-205ENST00000421625 SIGLEC16A6NMB1 481 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 UNGP13051 313 aaPredicted RBP22.5■■□□□ 1.19
USP48-205ENST00000421625 RCN1Q15293 331 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 SH3BP5LQ7L8J4 393 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 TRMT1LQ7Z2T5 733 aaKnown RBP22.5■■□□□ 1.19
USP48-205ENST00000421625 TDRPQ86YL5 185 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 PHC3Q8NDX5 983 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 GMCL1P1Q8NEA9 526 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 RFWD2Q8NHY2 731 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 SH3TC2Q8TF17 1288 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 NT5C1BQ96P26 610 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 PI4K2AQ9BTU6 479 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 LNPEPQ9UIQ6 1025 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 C2CD2LO14523 706 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 CCDC6Q16204 474 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 SNRNP35Q16560 246 aaKnown RBP22.5■■□□□ 1.19
USP48-205ENST00000421625 KRT39Q6A163 491 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 HAUS6Q7Z4H7 955 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 TEKT1Q969V4 418 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 C12orf65Q9H3J6 166 aaKnown RBP22.5■■□□□ 1.19
USP48-205ENST00000421625 METTL5Q9NRN9 209 aaKnown RBP22.5■■□□□ 1.19
USP48-205ENST00000421625 UMODL1Q5DID0 1318 aa22.5■■□□□ 1.19
USP48-205ENST00000421625 KLHL33A6NCF5 533 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 SLC16A4O15374 487 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 KRT36O76013 467 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 SLC1A1P43005 524 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 TEKT3Q9BXF9 490 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 WDR11Q9BZH6 1224 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 ETAA1Q9NY74 926 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 SUGT1Q9Y2Z0 365 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 ANKRD33BA6NCL7 494 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 BANF1O75531 89 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 PIAS1O75925 651 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 VHLP40337 213 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 SLC18A1P54219 525 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 SNX30Q5VWJ9 437 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 FAM43BQ6ZT52 329 aaPredicted RBP22.49■■□□□ 1.19
USP48-205ENST00000421625 ARL8BQ9NVJ2 186 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 STOML1Q9UBI4 398 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 USTQ9Y2C2 406 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 TMEM150BA6NC51 233 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 PMM2O15305 246 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 ECE2O60344 883 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 BBOX1O75936 387 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 ADRA1DP25100 572 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 SSR1P43307 286 aaKnown RBP22.49■■□□□ 1.19
USP48-205ENST00000421625 CCDC174Q6PII3 467 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 B3GNT9Q6UX72 402 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.49■■□□□ 1.19
USP48-205ENST00000421625 COA1Q9GZY4 146 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 GPRC5CQ9NQ84 441 aa22.49■■□□□ 1.19
USP48-205ENST00000421625 IPO5O00410 1097 aaKnown RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 DNALI1O14645 258 aaPredicted RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 PROSCO94903 275 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 LMNAP02545 664 aaKnown RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 KRT4P19013 534 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 GPC3P51654 580 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 RCN2Q14257 317 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 KPNB1Q14974 876 aaKnown RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 KAZNQ674X7 775 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 OR52E8Q6IFG1 317 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 TMEM179Q6ZVK1 233 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 ZBED8Q8IZ13 594 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms